pDisPathway-class {ROntoTools} | R Documentation

## Class that encodes the result of pDis analysis for a single pathway

### Description

Class that encodes the result of pDis analysis for a single pathway

### Slots

`map`:

  an object of type graph (e.g., `graphNEL`).

`input`:

  named vector of fold changes for genes on this pathway. The names of the genes are the orignal IDS used in the analysis

`ref`:

  vector of reference IDs on this pathway

`boot`:

  an object of class `boot` encoding the bootstrap information.

`pDis`:

  the gene primary dis-regulation for all genes on the pathway, as computed by primary dis-regulation.

`asGS`:

  pathway was considered as gene set

### Author(s)

Calin Voichita, Sahar Ansari and Sorin Draghici

### See Also

`pDis`, `pDisRes-class`

[Package ROntoTools version 2.12.0 Index]