Package: RCM
Type: Package
Title: Fit row-column association models with the negative binomial
        distribution for the microbiome
Version: 1.0.0
Author: Stijn Hawinkel <stijn.hawinkel@ugent.be>
Maintainer: Joris Meys <joris.meys@ugent.be>
Description: Combine ideas of log-linear analysis of contingency table, flexible response function estimation and empirical Bayes dispersion estimation for explorative visualization of microbiome datasets. The package includes unconstrained as well as constrained analysis.
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
Imports: RColorBrewer, alabama, edgeR, reshape2, tseries, vegan, VGAM,
        ggplot2 (>= 2.2.1.9000), nleqslv, phyloseq, tensor, MASS,
        stats, grDevices, graphics, methods
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
biocViews: Metagenomics, DimensionReduction, Microbiome, Visualization
BugReports: https://github.com/CenterForStatistics-UGent/RCM/issues
URL: http://users.ugent.be/~shawinke/RCMmanual/
git_url: https://git.bioconductor.org/packages/RCM
git_branch: RELEASE_3_9
git_last_commit: 8807e2f
git_last_commit_date: 2019-05-02
Date/Publication: 2019-05-02
NeedsCompilation: no
Packaged: 2019-05-03 05:36:23 UTC; biocbuild
Built: R 3.6.0; ; 2019-05-03 14:15:02 UTC; windows
