d899626bfdd384dd91c8b8199e8faa4f *CITATION
3879007b4815aa27c04967dd98bd6a49 *DESCRIPTION
e8590c21ca5e59f97ba8a4f64e4ddec0 *INDEX
179c91a924bd289526730c92a9788916 *Meta/Rd.rds
b06ab1a13ce3dd39bf592145b04e0831 *Meta/data.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
6ce8d0382e3fbf58d5ad35fe4868f756 *Meta/hsearch.rds
5f6632b2467f5b0ec838db8e29abc2e3 *Meta/links.rds
55785a08f6fdeca89dc801c5f567b7d9 *Meta/nsInfo.rds
adae31e4a06c047438700d6b5aa69e71 *Meta/package.rds
764c3eaa4122b00de913fb494420f3ee *Meta/vignette.rds
49ac124b0d4a80bf7dc47b79715e3f68 *NAMESPACE
c37a4f5f2a74fcbf3abf08197ae6ad4b *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/RCAS
61381eeb00fbe109236fb278ebdb2f0b *R/RCAS.rdb
8c9698d2c9b18167e8cde1fb31923571 *R/RCAS.rdx
6ef66442daf925736f9701ae5cdaf8c8 *data/Rdata.rdb
755eeece781b3715727e1f2a41922605 *data/Rdata.rds
e4fe8549d7efe2c4f7d27812346e4a74 *data/Rdata.rdx
2c0fc3deefcbcf2a786efa6d7b56e189 *data/datalist
2077b16a28c9acba8e80be8fb64ee38e *doc/RCAS.metaAnalysis.vignette.R
fe54a2d6bc82f877aea6d5309fd7b999 *doc/RCAS.metaAnalysis.vignette.Rmd
b0401b742e2bb92f6ef2c526e5a27e17 *doc/RCAS.metaAnalysis.vignette.html
03d0870863a622109453f2f188ef60b2 *doc/RCAS.vignette.R
eae14c71cd3106b4a2c54d86bee3ead6 *doc/RCAS.vignette.Rmd
017af73cfac589f06a7eda8aeb599b32 *doc/RCAS.vignette.html
247e560902e4d56eb3cc2fe9bec32180 *doc/index.html
4f8573e5f8b697319117c88327a4a236 *extdata/EIF4A3Sauliere20121a.bed
2779ca3ab60fcb8e560e86978c5aa1d2 *extdata/EIF4A3Sauliere20121b.bed
32aa8a32aa4b0b1b69dd340437d6e924 *extdata/FMR1_Ascano2012a_hg19.bed
d4d7442832f9b1d40ed3bb589326839a *extdata/FMR1_Ascano2012b_hg19.bed
5ae985d0d00b8dbc5c4e51481d2799b4 *extdata/FUS_Nakaya2013c_hg19.bed
53ec61cdf36a09a61f64ca31fdf0a0ae *extdata/FUS_Nakaya2013d_hg19.bed
2af4c54bf647b7e46dec40972101443e *extdata/hg19.RCASDB.sqlite
f0de64b19c59a7b202c8faff4d599ace *extdata/hg19.sample.gtf
99fb8d5b4e2fc1a11b4e92d5bd994d05 *extdata/hg19.sample.gtf.granges.rds
aa87ec9a0e15f7849d72747634b911ce *extdata/msigdb_test.gmt
8cea927d9a40a56fbdb778eae43f81e5 *extdata/testfile.bed
8cea927d9a40a56fbdb778eae43f81e5 *extdata/testfile2.bed
5c2561dda8172f73b4b71fc28d36768c *help/AnIndex
285771fb025e0a52f59dd6f23f543399 *help/RCAS.rdb
9d39b75632f60c8dfb8dff33f1065e03 *help/RCAS.rdx
2c1e38689ab219752b68677b29f48ea3 *help/aliases.rds
34eda817637ab2075251ce9f203e7e09 *help/paths.rds
d27dca7a3c46c383dda6b7b1454777b5 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
814e02f616ba53458b0d002216749996 *html/calculateCoverageProfile.html
b0f2c6000b1a9c56b46acad6e902709f *html/calculateCoverageProfileFromTxdb.html
6f59b556d0210bd7b6062c633f8e2163 *html/calculateCoverageProfileList.html
763cb293f4b6f82d93ab73de3309be6b *html/calculateCoverageProfileListFromTxdb.html
b774a479c68fed3ab6a79f63cb316a57 *html/createControlRegions.html
feaaa89d6f8b2947f17effbb52209e30 *html/createDB.html
f53203f9a30eb82e7644b8475ebefda7 *html/createOrthologousGeneSetList.html
ac9d4dfbde26555b697a75299e151959 *html/deleteSampleDataFromDB.html
d9b9b9cf2adf37f07ca2c6ff80c335da *html/discoverFeatureSpecificMotifs.html
7e6f6e37debd32e74c0c408ec0e58120 *html/extractSequences.html
9ef79274839bf8e0d6ba925faf21f060 *html/geneSets.html
b3075c9fc1de7438222868369581e4bb *html/getFeatureBoundaryCoverage.html
8f72a54ad3b35f48b2ed2cd5467ad832 *html/getFeatureBoundaryCoverageBin.html
82b9659ef7cf6fa20006d4fc66f28f0b *html/getFeatureBoundaryCoverageMulti.html
aa13aa2b9c19d1dc1838cd7578b64e35 *html/getIntervalOverlapMatrix.html
9102bce8d0a453dc21b3338157e51e6a *html/getMotifSummaryTable.html
a62b3c88c3a7ae206196e5bc6a8b9474 *html/getTargetedGenesTable.html
c75610c551e33c9224f99042ce2c1e35 *html/getTxdbFeatures.html
6e0e96d693e47e065ff92ebf21339abd *html/getTxdbFeaturesFromGRanges.html
6be19919cfe0fad9e07a7c180d50a4f5 *html/gff.html
43ba5cba8c152758ddb7fe2533749861 *html/importBed.html
d4e817daa72aff71d4d991ca4a83ebbe *html/importBedFiles.html
7e0deae6602249d2f0c2a55346ed4186 *html/importGtf.html
aed0b1c0c76c3dfa8ea6a0bb0bc2766a *html/parseMsigdb.html
56665aa19a42e7e75ad43dfa7f1cfdb2 *html/plotFeatureBoundaryCoverage.html
f942a46cd1be41c76eeeb81afdeaa277 *html/printMsigdbDataset.html
0e03b043a0b32338ea6fd7efffa0df4b *html/queryGff.html
da90f2d86967a5266543b0f58d9d3893 *html/queryRegions.html
3241c938d3c47304d5a47d493e2f9793 *html/retrieveOrthologs.html
cebe823e641d2c01d7ab8d268e5f6a78 *html/runGSEA.html
13dd09824f1562e5c0705f27c6017a5f *html/runMotifRG.html
914eb920c8637f754d2cd8f2ae27d3dd *html/runReport.html
e7373c2978a90aa7120fe9edf032825c *html/runReportMetaAnalysis.html
a0d5e4aab5846d6add458fda59b8f110 *html/runTopGO.html
9279922196c8e791e7d8d8c437575260 *html/summarizeDatabaseContent.html
f29286a734d95c6e2b86931f03ec8a01 *html/summarizeQueryRegions.html
f90005738f9e9e1aac8b2fae53ef538a *html/summarizeQueryRegionsMulti.html
053cf68e09070e277a798b0736fb7874 *reporting_scripts/footer.html
b1442cb874099cb5af45301431024ee0 *reporting_scripts/header.html
ca9f8bbe5141ee97943aadede0fac8d1 *reporting_scripts/report.Rmd
e6ab695c29d907c81228c883e5af619c *reporting_scripts/reportMetaAnalysis.Rmd
