3748213c8d39bd22bfe3247d776d539d *DESCRIPTION
1adc7f1dd2255de597a3eda9e40aa1f7 *INDEX
300edc4bccf9fad8c8996d8f1e0fe4e1 *Meta/Rd.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
49ae9f834aafe0a4af0aee5c425cbe8c *Meta/hsearch.rds
633ef6fe4e2557344b395de411d6fe91 *Meta/links.rds
6b3f35b3f368f9083280c3bd2bab4387 *Meta/nsInfo.rds
707018e8aaeb8172ae13fa1a17a6d55f *Meta/package.rds
9ae863cd8602a5e8f8ba56c558241b48 *Meta/vignette.rds
592791f90550f9649773a2d69234e38b *NAMESPACE
b7fb900790a740d862746997648dec09 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/PWMEnrich
37e7d2536178d4b6a6090a1df8dbd774 *R/PWMEnrich.rdb
ece17c9682ac38c037c5c8dadc35e960 *R/PWMEnrich.rdx
fab7dcd868071f0d37ee37d0cc4c957c *doc/PWMEnrich.R
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97ea684f7a8218dfe8a5255377f24c7a *extdata/bg.seq-test.RData
16737864e28ca293c3d43c9dc274e810 *extdata/example.fa
08048d68adc5c8493db6f4350732af86 *extdata/example.transfac
415a8826cfb40c10021953ac725c3f78 *extdata/jaspar-insecta.jaspar
378529a644ccceb87d72f3204dda1d59 *extdata/pfm_vertebrates.txt
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2e6e376108f87945c08ffde1cd39a097 *extdata/tinman-early-top20.fa
bccfd13ec6ce43fcaddf0fe2779c6856 *help/AnIndex
0fcde345adec896541b4b54567d5a294 *help/PWMEnrich.rdb
4cf690fada9c7e04b9251c2bc2c0931c *help/PWMEnrich.rdx
8a4911b1c1396878b5bf2643274170c4 *help/aliases.rds
36750c59d58ed74a4f0c336b1e15fb1a *help/paths.rds
4324857167214c5ba103f56ae9262199 *html/00Index.html
aefb38257a4d1ffcbb882a4946f68825 *html/MotifEnrichmentReport.html
291e6f8c2956612c4e3dc35f238d1ece *html/MotifEnrichmentResults.html
8d89bf58166fcb3461355ecc11d69ff3 *html/PFMtoPWM.html
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ce9f3a4caaf7fe03786c037fa0a83e92 *html/PWMEmpiricalBackground.html
df00eafba0e475134b734da59ccdeea9 *html/PWMGEVBackground.html
9350cec06ac6ba2617ce6fbc2d7074ed *html/PWMLognBackground.html
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0a2c6e9c90239dd673c5018130b6fcf1 *html/groupReport-commaMotifEnrichmentResults-method.html
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daf08b23de065b19e1b5582fc0a11abe *html/makePWMCutoffBackground.html
05d431488d71cbeda26f678afcdff6d6 *html/makePWMEmpiricalBackground.html
5380bd3be48cfffe821f72651a1e3090 *html/makePWMGEVBackground.html
5be10fba6062ea9ba819629c7c806930 *html/makePWMLognBackground.html
8f68f6d381e2ae9dd1f84e5b43ad4de8 *html/makePWMPvalCutoffBackground.html
1827a03e3ee1b3ab42e21e287c66255b *html/makePWMPvalCutoffBackgroundFromSeq.html
5e8ced441450caaa4fdc23b9e1f4cea4 *html/makePriors.html
a8d841f8c269b018e2f66693b6a860ac *html/motifDiffEnrichment.html
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6e068e02547352202aa32be9e0e128d8 *html/motifEnrichment.html
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58156f27354236d039f0f62c7563cd46 *html/motifRankingForSequence-commaMotifEnrichmentResults-method.html
7ae3becffb569e4676485145e8e4614e *html/motifScores.html
fa1699899162f377936740113add2c1f *html/motifSimilarity.html
bd306714f49efbdfdd2c53e7c521afc0 *html/operators-MotifEnrichmentReport.html
bcb0cdcb97d21ef94eef4a7b31cbdcdf *html/operators-MotifEnrichmentResults.html
ea1c8ee0ca8474bf0dc412e2071854ba *html/operators-PWM.html
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a6572f9dddfd04f0dfc9d98ba07e34a2 *html/operators-PWMLognBackground.html
786f5df88c94c5575b91bff04778b723 *html/plot.html
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8c5daf0a5dcfde1f82b29b8f9199e397 *html/plotMultipleMotifs.html
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ac4a96e59d4a454cae3431c4c057e70b *html/readMotifs.html
5b80c6843127c3bf7a5ce12c1d76e40d *html/registerCoresPWMEnrich.html
e27ea79dba655e2737de462b965af5a0 *html/reverseComplement.html
afe13583e67c935edc30d8eac8b2b2b1 *html/scanWithPWM.html
44c83c5b85e72495c31e093c0c4d4716 *html/seqLogoGrid.html
e8a450fca467ea577c94a57708df2459 *html/sequenceReport-commaMotifEnrichmentResults-method.html
d4bc893c6ec4b7c7560cec4c57a3545f *html/subsetting-PWMCutoffBackground.html
2446ada7f6fa7bcccda8f0eabd78b25a *html/subsetting-PWMEmpiricalBackground.html
c90e69e87f87089ea81f20e11e0f8bcb *html/subsetting-PWMGEVBackground.html
c706bdb525a7e82f96142d2c89ba81b3 *html/subsetting-PWMLognBackground.html
d278b2bc4fca80edc06339f788036df6 *html/toPWM.html
197e18bb3168945529e6e2bab1c08876 *html/useBigMemoryPWMEnrich.html
f980cf6e1a56c37da2588b23b5e3525c *tests/test_clover.R
5ac6eb9e4d6cfbd62cf60c4c26bd8dba *tests/test_invalidInput.R
0b26bedee71d0a29f0c38fc32cda75ed *tests/test_motifEnrichment.R
2d850d37342371c6afeb0e055c33c19b *tests/test_similarity.R
