plot_pathways {PAST} | R Documentation

## Plot Rugplots for Selected Pathways

### Description

Plot Rugplots for Selected Pathways

### Usage

    plot_pathways(rugplots_data, filter_type, filter_parameter, mode,
      output_directory)

### Arguments

`rugplots_data` | The data to be plotted (returned from find_pathway_significance())
`filter_type` | The parameter to be used for filtering
`filter_parameter` | The cut-off value of the filtering parameter
`mode` | The mode used to create the data (increasing/decreasing)
`output_directory` | An existing directory to save results in

### Value

Does not return a value

### Examples

    example("find_pathway_significance")
    plot_pathways(rugplots_data, "pvalue", "0.03", "decreasing", tempdir())

[Package PAST version 1.0.1 Index]