addNewTSSOnLeaders {ORFik} | R Documentation

## add cage max peaks as new transcript start sites for each 5' leader (*) strands are not supported, since direction must be known.

### Description

add cage max peaks as new transcript start sites for each 5' leader (*) strands are not supported, since direction must be known.

### Usage

    addNewTSSOnLeaders(fiveUTRs, maxPeakPosition, removeUnused)

### Arguments

`fiveUTRs` | The 5' leader sequences as GRangesList
`maxPeakPosition` | The max peak for each 5' leader found by cage
`removeUnused` | logical (FALSE), remove leaders that did not have any cage support. (standard is to set them to original annotation)

### Value

a GRanges object of first exons

[Package ORFik version 1.4.1 Index]