plotSig {NADfinder} | R Documentation

## Plot signals with ideograms

### Description

Plot signals with ideograms for GRangesList.

### Usage

    plotSig(ideo, grList, mcolName, ...)

### Arguments

`ideo` | Output of loadIdeogram.
`grList` | A GRangesList of data to plot.
`mcolName` | Column name of metadata of GRangesList for plotting.
`...` | Parameters to pass to ideogramPlot

### Value

Invisible argument list for ideogramPlot.

### Examples

    library(trackViewer)
    #ideo <- loadIdeogram("mm10")
    ideo <- readRDS(system.file("extdata", "ideo.mm10.rds",
                                 package = "NADfinder"))
    gr1 <- gr2 <- ideo
    mcols(gr1) <- DataFrame(score=runif(length(gr1)))
    mcols(gr2) <- DataFrame(score=runif(length(gr2)))
    grList <- GRangesList(gr1, gr2)
    plotSig(ideo, grList, mcolName="score", layout=list("chr1"))

[Package NADfinder version 1.8.1 Index]