readPWMfile {MotIV} | R Documentation

## Read Transfac File

### Description

This function is use to read standard Transfac type file.

### Usage

      readPWMfile(file)

### Arguments

`file` | Transfac file's name.

### Details

This function is designed to read standard Transfac type file. For more information about the format, please refere to http://mcast.sdsc.edu/doc/transfac-format.html

### Value

A list of matrix.

### Author(s)

Eloi Mercier <emercier@chibi.ubc.ca>

### Examples

    #####Database and Scores#####
    path <- system.file(package="MotIV")
    jaspar <- readPWMfile(paste(path,"/extdata/jaspar2010.txt",sep=""))
    jaspar.scores <- readDBScores(paste(path,"/extdata/jaspar2010_PCC_SWU.scores",sep=""))

[Package MotIV version 1.40.0 Index]