alignments-class {MotIV} | R Documentation

## Class "alignments"

### Description

This object contains the alignments found by a MotIV analysis.

### Objects from the Class

Objects can be created by calls of the form `new("alignments", TF, evalue, sequence, match, strand )`.

### Slots

TF

  Object of class `"TF"`

evalue

  The e-value of the alignment.

sequence

  The input sequence aligned.

match

  The TF sequence wich as been matched.

strand

  The strand of the alignment.

### Author(s)

Eloi Mercier <emercier@chibi.ubc.ca>

### See Also

`motiv` , `matches`, `transcriptionFactor`

[Package MotIV version 1.40.0 Index]