matches-class {MotIV} | R Documentation

## Class "matches"

### Description

This object contains the name of the input motif and all the matches found.

### Objects from the Class

Objects can be created by calls of the form `new("matches", name, aligns, similarity, valid)`.

### Slots

name

  Motif name.

aligns

  Alignments found by `motifMatch`.

similarity

  The optional name given to the motif.

valid

  The alignment that should be considered as valid.

### Author(s)

Eloi Mercier <emercier@chibi.ubc.ca>

### See Also

`motiv` , `alignments`, `tf`

### Examples

    showClass("matches")

[Package MotIV version 1.40.0 Index]