MM_conv_id {MiRaGE} | R Documentation

## miRNA conservation table generation function

### Description

This function generates conv_id, which describes conservation information of each mouse miRNA, from the scratch

### Usage

    MM_conv_id(taxid=10090,species="mmu",destdir="./")

### Arguments

`taxid` | taxon id for human. Default is 11090
`species` | Three characters string which describe human. Default is "mmu".
`destdir` | Directory where "MM_conv_id" is saved. Default is "./".

### Details

This function computes conv_id, which describes conservation information of each mouse miRNA, used in the MiRaGE server described in Yoshizawa et al (2011). It saves data frame conv_id as the name of "MM_conv_id" in the destination directory.

### References

Yoshizawa, M., Taguchi, Y-h., and Yasuda, J. (2011), Inference of Gene Regulation via miRNAs During ES Cell Differentiation Using MiRaGE Method. Int J Mol Sci 12(12):9265-9276

### Examples

    ## Not run: MM_conv_id()

[Package MiRaGE version 1.26.0 Index]