7c940e117947d1495fc805a56a585f95 *AQP7/hg19_AQP7_gr.RDS
6156e25892b953e3e13c482d42533c6b *AQP7/hg38_AQP7_gr.RDS
f94518f75e6ef1068674f303a991e850 *AQP7/hs37d5_AQP7_gr.RDS
36662c6a1344eb7c99a4a0eb34362649 *DESCRIPTION
922249828dc8beb59b6c8edbbcfb726e *HLA/hg19_HLA_gr.RDS
6cadaac2a031fa5e81230e7b6eef0818 *HLA/hg38_HLA_gr.RDS
eb80de88f333fc8bd1b2fe22a069800c *HLA/hs37d5_HLA_gr.RDS
5b17382d757b8568a16a287782bb8b25 *INDEX
7246c31d5a460e17b910a7f9c9fd98c1 *Meta/Rd.rds
e59750291a11d19a3e4885e7b05d91e6 *Meta/data.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
e452cfee02a8fe4493938e2be00cca32 *Meta/hsearch.rds
61637fbc5d1fbeedf60047200c8e87cb *Meta/links.rds
640b629e81641ce17409c4ad04632a4f *Meta/nsInfo.rds
46e9b894bba4d5309b04c6696e97b524 *Meta/package.rds
8c707ffb69d1a19b87039ff585a28fda *Meta/vignette.rds
dbbb8416030ca6c55bd60ab19bb59110 *NAMESPACE
f68885c1e19e41468d3a26d044204323 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/MADSEQ
e8d69710f3189f4465b998e5079cdf04 *R/MADSEQ.rdb
4606a1aeae80d4212aa97d294164a8ce *R/MADSEQ.rdx
599c058f1adcc3a7d8c90faa83c97c0e *data/Rdata.rdb
cdbfa871c52d2f180149749520d10b74 *data/Rdata.rds
1f58500fa8750a2217009bcd9c0f5f0f *data/Rdata.rdx
c8b39fb1864574e045aecb513d6d1f5f *doc/MADSEQ-vignette.R
223d4a9d1f4b7467fa58dd887b2d207a *doc/MADSEQ-vignette.Rmd
d723039132ab88b3b954ba899d409d09 *doc/MADSEQ-vignette.html
8d2a12cbcba7e2d17c0a7f5e2ce7d491 *doc/index.html
45a6f85c06b89084384f5baa3411829c *extdata/aneuploidy.bam
5d2f9800c7701b9c069549d9b538f3c0 *extdata/aneuploidy.bam.bai
e447cdbc61dc910c1ecf49413830e680 *extdata/aneuploidy.vcf.gz
801ca98d5c1fc701890c8720829ba02e *extdata/aneuploidy.vcf.gz.tbi
3460ad549cd63b775e1e2d2c6839c652 *extdata/aneuploidy.vcf1.gz
42c16af5590d9f56b3cd4ee1f640f09e *extdata/normal.bam
27360ec7b0b8b4f49baab9fb28a81b31 *extdata/normal.bam.bai
d8d3ffb5a1f6a0662e85497ec4e2f7da *extdata/normal.vcf.gz
c7af036642ac3916f25d4568da51f929 *extdata/target.bed
6ac2988079669859297d35397890ee7f *gap/hg19_gap_gr.RDS
2ee634fa8ac714a611294c4ebbe964c6 *gap/hg38_gap_gr.RDS
178175aedaf19d4b5fc37b953fdd8365 *gap/hs37d5_gap_gr.RDS
806e412887257e27d215b26eb8427a23 *help/AnIndex
d415399e7231bde017aa446ce4aa9353 *help/MADSEQ.rdb
a048b8e871ce8d1366e385230d51e5b7 *help/MADSEQ.rdx
8ef3b74cf479334c520e1c54225ab684 *help/aliases.rds
eeba4638c819205541d898d66f043548 *help/paths.rds
3cf4627942b5f3e1b5e656355a2625eb *html/00Index.html
e844ba904077dda5cf93312d6048db5c *html/MADSEQ-package.html
ea1a8854ade39dec3ab34375f6c29eb8 *html/MadSeq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
665e41e03f4dfc406e3530fd1e2f1971 *html/aneuploidy_chr18.html
618fb87fc742363cf7c0a2af7d025adc *html/deltaBIC.html
8c1a8a7f31d3a713dde82d384b07b9cc *html/normalizeCoverage.html
ef5a00d95981c7d99c225c9a42b2f414 *html/plotFraction.html
df195a19113b77a348649657a5e84058 *html/plotMadSeq.html
20d878428437b3039fd8c62917e08547 *html/plotMixture.html
1e0edf562836e527012c70fe7b1dca73 *html/posterior.html
338dfa1af1696150971645a9e40fb59d *html/prepareCoverageGC.html
7f72dadd9f7400777d3948f4092b1217 *html/prepareHetero.html
ec1804add3816ecc4294546526b60a40 *html/runMadSeq.html
fbe3b9740eadd9e0c2402e218bb8ec70 *html/summary-method.html
d53a9eb3d9e812c6f07ff9c3340a3bed *rjags/FourMix.txt
91892f4c8a1065de46951f299d8e2d5f *rjags/LOH.txt
5930df090a3de2ff95284ec8e5724584 *rjags/OneMix.txt
80f9a5a9b492296fe89b8ddf793779b9 *rjags/TwoMixMonosomy.txt
fd18d5914f99278bc7bf005e6fded968 *rjags/TwoMixTrisomy.txt
