a922f2544b436d4baea5537dd3cd5354 *CITATION
57d57b98ef274bcd54ddfe12d00b394b *DESCRIPTION
e5ab8fc36593747faeecbb1631bab616 *INDEX
198050800882cae2cb9bc003564dac39 *Meta/Rd.rds
9ee92cf1ee395650ea3506a34c91c4b6 *Meta/data.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
ada42c10313e2a69fba22b63c942b6d4 *Meta/hsearch.rds
137c2a096b83dd176537842afb10b9d5 *Meta/links.rds
7fbb61b14904db970ba5f4cb66362a4c *Meta/nsInfo.rds
5968ac82b0ab22132333b2b567c23848 *Meta/package.rds
5246dde20ca9d20f00c9d61a4e5bf8ca *Meta/vignette.rds
861641a6de00d3a8bcf1b6ddae8b28a1 *NAMESPACE
781899a06acaaaa8596c45d1f240e9a4 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/LOLA
6cc7f4ee0220abce531da5da11ccccd7 *R/LOLA.rdb
d7c41d3055cc0a2df6a92504469f8731 *R/LOLA.rdx
0defdf6d57daf84628f1f4746e5c433e *data/sample_input.RData
4143de810969370e9d4dde813314c121 *data/sample_universe.RData
77479d855769a35d74a7a4ef23809d25 *doc/choosingUniverse.R
ab8ecf837ac883c0c5587e2143707970 *doc/choosingUniverse.Rmd
f3f29b611f52a09c597ccbbcaf767cb5 *doc/choosingUniverse.html
10635777aed086ae00d20560e01b4f44 *doc/gettingStarted.R
f203a26bdd7139fe5360f13486af09d9 *doc/gettingStarted.Rmd
4df1b34774cd8bb53296a4d214777737 *doc/gettingStarted.html
85222a6636e14ddad8fb7579293991a2 *doc/index.html
4282708ee652a1997cef00080bba8653 *doc/usingLOLACore.R
09247d5a0ee802b06a452dd4a2d9f05e *doc/usingLOLACore.Rmd
5b8ba3ad19d17b21a815cfd53554a311 *doc/usingLOLACore.html
8a0e9d873cc0409b0ca4e83103a458e4 *extdata/examples/combined_regions.bed
0abeb2e38c96db3c248da710a90ad5c4 *extdata/hg19/ucsc_example/collection.txt
d27f1ef73a44abc577b95ac8b7858098 *extdata/hg19/ucsc_example/index.txt
2efe7d09742fbd7d5668dcd0c8d15db3 *extdata/hg19/ucsc_example/regions/cpgIslandExt.bed
c91cf10ca317235a54ff5f26c2ddb51c *extdata/hg19/ucsc_example/regions/laminB1Lads.bed
77a3e268a8d6bf32613d5cfd46328eef *extdata/hg19/ucsc_example/regions/numtSAssembled.bed
b81ae934b502bda2ec59f31be5ee7675 *extdata/hg19/ucsc_example/regions/vistaEnhancers.bed
0d6aacd8d87eea2c5b1ccfc09971d561 *extdata/hg19/ucsc_example/regions/vistaEnhancers_colNames.bed
59cd3432078d90b537ef01021a9de7af *extdata/hg19/ucsc_example/sizes.txt
0abeb2e38c96db3c248da710a90ad5c4 *extdata/multi/collection1/collection.txt
d27f1ef73a44abc577b95ac8b7858098 *extdata/multi/collection1/index.txt
ec6fce6a86d27a7b09ceed833ce4b556 *extdata/multi/collection1/regions/cpgIslandExt.bed
a97b82aa363c1e9480170298f7fa3cbe *extdata/multi/collection1/regions/laminB1Lads.bed
01d9b39aebef8ea39e627474374c0d85 *extdata/multi/collection1/regions/vistaEnhancers.bed
2a6cddabb1aac76451c69a354f0b249f *extdata/multi/collection1/sizes.txt
d27f1ef73a44abc577b95ac8b7858098 *extdata/multi/collection2/index.txt
ec6fce6a86d27a7b09ceed833ce4b556 *extdata/multi/collection2/regions/cpgIslandExt.bed
a97b82aa363c1e9480170298f7fa3cbe *extdata/multi/collection2/regions/laminB1Lads.bed
01d9b39aebef8ea39e627474374c0d85 *extdata/multi/collection2/regions/vistaEnhancers.bed
2a6cddabb1aac76451c69a354f0b249f *extdata/multi/collection2/sizes.txt
ef69bcd9775360a263093ba83f63a6c9 *help/AnIndex
164375b1e4b4b58704dd2f2729849366 *help/LOLA.rdb
30ca9709acdac21e696f2b1ece71ed86 *help/LOLA.rdx
3b16a79e8836b8c6a6bce2a93f132048 *help/aliases.rds
20a305651e32492e86a8a690fd28e1e4 *help/figures/LOLA-logo.png
969d28c48afff5cfdd9ac0f94935afaf *help/paths.rds
aaa3ac35422e4cd8afc2879fd9e61936 *html/00Index.html
46b7ab4bf4f834069afe4d65b4c2cc48 *html/LOLA.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
bdb2a2ac6ec6428ddfa9bfc3c45c8cba *html/buildRestrictedUniverse.html
b50bba3c4f2525767a7ceb9a57b4a99b *html/checkUniverseAppropriateness.html
82913508bb6d1429d57b2cacfbbc5f54 *html/cleanws.html
e408c01675f9c8c9be2620f34df809c9 *html/countOverlapsAnyRev.html
ce2696081699ad562e21ca97884572ef *html/extractEnrichmentOverlaps.html
2961728460f58dc19f26215ce8218042 *html/getRegionFile.html
b2771afddeebcdc5c8b6706dde004716 *html/getRegionSet.html
d52afd4e55c472a8f609a371250f5e80 *html/lapplyAlias.html
1605d76a918566778e8feaba656404fc *html/listRegionSets.html
588e319dbef91c84f7533d19d90e67d4 *html/listToGRangesList.html
e8625d2e5213f9e8f7c6058b87777165 *html/loadRegionDB.html
d46d99629b0c5039ae12b8c1a26e621e *html/mergeRegionDBs.html
b17dce6a1517457abf5a63fc49ba927a *html/nlist.html
e97562f2d89f9bd07baa99f5b1201ab5 *html/plotTopLOLAEnrichments.html
8eb57207c982c7e5ea38060bdc0bdb38 *html/readBed.html
1a2e3cd539cea0c2a8424e4bc0a10a60 *html/readCollection.html
8347c8e4daa30997f6487556d5d2c301 *html/readCollectionAnnotation.html
f4332260b8b06436f679d034ee3aba8b *html/readCollectionFiles.html
6fc43d91dd1220412801883e25118580 *html/readRegionGRL.html
0207443e059e0764ad0b7eb2ee6620f1 *html/readRegionSetAnnotation.html
5e378b18ebb3b7d34d7ec79a57254d1b *html/redefineUserSets.html
07ed86e0d90fa3f79409b64da6f738af *html/replaceFileExtension.html
8c8514ae737e15e965c4160ec529e2de *html/runLOLA.html
b113029b590907879cfa237ab8f11016 *html/sampleGRL.html
0467da2abf436ff60d071fbae58bf47f *html/setLapplyAlias.html
c8ca364da7c16a8400badd3e7b965871 *html/setSharedDataDir.html
12e3b427e04b5f7aa2db6abf278f2c40 *html/splitDataTable.html
efc595ff14f9e550ab177c194d34d3fc *html/splitFileIntoCollection.html
4878b3f5b9362246050ca96dc97d76fd *html/userSets.html
7abba12c81cf5d028fa346bcf340b68d *html/userUniverse.html
a0479c87af778e96d0dcc4291311f037 *html/write.tsv.html
05e0b9742ca8a36107dce7f36bda09f4 *html/writeCombinedEnrichment.html
ba5057ad4495c938ab23d7d414885cbd *html/writeDataTableSplitByColumn.html
6662a2735721f99529114c9c0c1a95e4 *scripts/LOLA
2197004cbfb72f0b77fb1fafec0c6bdd *web/index.html
9d6c306930e625fdd0c9fd13c2c7ffdb *web/webComponents/ajax-loader.gif
592477d76c8e6a9898b729f9608becd2 *web/webComponents/d3.min.js
d307496efe5fbac7d5164c5ef8536971 *web/webComponents/gridstyle.css
