getCov {InPAS} | R Documentation

## extract coverage from bedgraph file

### Description

extract coverage from bedgraph file

### Usage

    getCov(bedgraph, genome, seqLen)

### Arguments

`bedgraph` | bedGraph file names
`genome` | an object BSgenome
`seqLen` | lengthes of each chromosome

### Value

a Rle object for a sample coverage

### Author(s)

Jianhong Ou

### See Also

`coverageFromBedGraph`

[Package InPAS version 1.16.3 Index]