singleSampleAnalyze {InPAS} | R Documentation

## do analysis for single sample

### Description

do analysis for single sample by a hidden Markov model

### Usage

    singleSampleAnalyze(UTR3eset)

### Arguments

`UTR3eset` | must be the output of `getUTR3eSet`

### Details

the test will be performed by a two states hidden Markov model.

### Value

a metrix of test results

### Author(s)

Jianhong Ou

### See Also

`UTR3eSet`, `getUTR3eSet`, `depmix`

### Examples

        path <- file.path(find.package("InPAS"), "extdata")
        load(file.path(path, "eset.MAQC.rda"))
        res <- singleSampleAnalyze(eset)

[Package InPAS version 1.16.3 Index]