IPO-package             Automated Optimization of Untargeted
                        Metabolomics LC-MS Data Processing
attachList              Attaching one list at the end of another
calcPPS                 Calculation of a peak picking score (PPS) by
                        using natural, stable 13C isotopes
calculateXcmsSet        Calculation of an xcmsSet-Object
combineParams           Combining two lists of parameters together.
createModel             Creating a response surface model.
decode                  En-/decodes values to/from ranges of -1 to 1.
findIsotopes.CAMERA     Identification of Isotopes using the package
                        CAMERA.
findIsotopes.IPO        Identification of 13C isotopes
getBbdParameter         Creates a Box-Behnken Design of experiment
getCcdParameter         Creates a Central-Composite Design of
                        experiment
getDefaultRetCorCenterSample
                        Gets the index of the sample with most peaks in
                        it.
getDefaultRetGroupStartingParams
                        Gives a List of parameters for xcms-methods
                        retcor.obiwarp or retcor.loess and
                        group.density which are optimized by default
getDefaultXcmsSetStartingParams
                        Creates a List of parameters for xcms-methods
                        xcmsSet.findPeak which are optimized by default
getNormalizedResponse   It combines Retention time Correction Scores
                        (RCS) and Grouping Scores (GS)
getRGTVValues           Calculation of values used for a Retention time
                        correction and Grouping Target Value (RGTV)
optimizeRetGroup        Optimization for parameters for retention time
                        correction and grouping
optimizeXcmsSet         Optimisation of peak picking parameters by
                        using natural, stable 13C isotopes
toMatrix                Converts an array into a matrix
typeCastParams          Splits parameters into those which should be
                        optimized and those which are fixed.
writeParamsTable        Writes XCMS settings to a file.
writeRScript            Prints an R-script to the screen which can be
                        used for xcms processing
