Brick_get_bintable {HiCBricks} | R Documentation

## Returns the binning table associated to the Hi-C experiment.

### Description

`Brick_get_bintable` makes a call to `Brick_get_ranges` to retrieve the binning table of the associated Brick store. This is equivalent to passing the argument rangekey = "bintable" in `Brick_get_ranges`

### Usage

    Brick_get_bintable(Brick, chr = NULL)

### Arguments

`Brick` | Required. A string specifying the path to the Brick store created with CreateBrick.
`chr` | Optional. A chr string specifying the chromosome to select from the ranges.

### Value

Returns a GRanges object containing the binning table associated to the Brick store.

### See Also

Brick_get_ranges

### Examples

    Brick.file <- system.file("extdata", "test.hdf", package = "HiCBricks")
    Brick_get_bintable(Brick = Brick.file)

[Package HiCBricks version 1.2.0 Index]