Brick_mcool_normalisation_exists {HiCBricks} | R Documentation

## Check if a normalisation exists in an mcool file.

### Description

`Brick_mcool_normalisation_exists` checks if a particular normalisation exists in an mcool file.

### Usage

    Brick_mcool_normalisation_exists(mcool, norm.factor = NULL,
        binsize = NULL)

### Arguments

`mcool` | Required. Path to an mcool file.
`norm.factor` | Required. The normalization factor to use for normalization from an mcool file. norm.factor currently accepts one of "Iterative-Correction", "Knight-Ruitz", "Vanilla-coverage", "Vanilla-coverage-square-root".
`binsize` | Optional. The binsize to select from an mcool file.

### Value

A boolean vector of length 1

### Examples

    ## Not run:

    require(curl)
    curl_download(url = paste("https://data.4dnucleome.org/"
    "files-processed/4DNFI7JNCNFB/"
    "@download/4DNFI7JNCNFB.mcool",sep = ""),
    destfile = "./H1-hESC-HiC-4DNFI7JNCNFB.mcool")

    mcool <- "./H1-hESC-HiC-4DNFI7JNCNFB.mcool"
    Brick_mcool_normalisation_exists(mcool = mcool,
    norm.factor = "Iterative-Correction",
    binsize = 10000)

    ## End(Not run)

[Package HiCBricks version 1.2.0 Index]