hpa_downloaded_histology_v18 {HPAanalyze} | R Documentation

## HPA histology dataset

### Description

Dataset downloaded with `hpaDownload('histology', version = 'v18')`.

### Usage

    hpa_downloaded_histology_v18

### Format

A list of 3 tibbles

normal_tissue

  Normal tissue IHC data

pathology

  Cancer IHC data

subcellular_location

  Subcellular location IF data

### Details

Links to original data:

- https://v18.proteinatlas.org/download/normal_tissue.tsv.zip

- https://v18.proteinatlas.org/download/pathology.tsv.zip

- https://v18.proteinatlas.org/download/subcellular_location.tsv.zip

### See Also

`hpaDownload`

### Examples

      # load data
      data("hpa_downloaded_histology_v18")

      # access tibbes
      normal_tissue_data <- hpa_downloaded_histology_v18$normal_tissue
      cancer_data <- hpa_downloaded_histology_v18$pathology
      subcell_location_data <- hpa_downloaded_histology_v18$subcellular_location

[Package HPAanalyze version 1.2.1 Index]