bcb46671f9de67f4c98c54cd2fb7b0a6 *CITATION
fb580cb6aae23a125d456ee5aacdadf8 *DESCRIPTION
a090c378b849959998064fe77656902a *INDEX
49938ddd229094a0bfbbeff881e0dfd7 *Meta/Rd.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
e848b10228eee8541d920dceb2216436 *Meta/hsearch.rds
5002feeae0ebe09e361bfdf71cdc4e3c *Meta/links.rds
4893a3b139b30f1d06a0527284b37462 *Meta/nsInfo.rds
163c6f95618926ba2a5852b01cba9d4b *Meta/package.rds
69023774d61dd3cfb4628a2a2d7e8a7e *Meta/vignette.rds
95563721a9be3cd1215457c22f95905e *NAMESPACE
55a54f5ca77bfa3cf772bdb142304cfb *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/GenomicFeatures
fcb0c31efcba38c12029c9103275b2a0 *R/GenomicFeatures.rdb
8526e38cf189eee2da43a4b80d533351 *R/GenomicFeatures.rdx
4781b99d424294289dfd3281fd3da958 *doc/GenomicFeatures.R
98e2163ae4b5f22a67cc55177003bf7a *doc/GenomicFeatures.Rnw
7984d387e93cd770c30bc0473b6ba390 *doc/GenomicFeatures.pdf
39fcd129b587c9b13b0354e47f82b45f *doc/index.html
01f49cc01f90bcd4a13864612fc912d5 *extdata/Biomart_Ensembl_sample.sqlite
3f250ddeef2036ad04e3262997971de0 *extdata/FeatureDb.sqlite
d38408aacac9d246163b4adf7c222605 *extdata/GFF3_files/NC_011025.gff
1184ef3c4b19f9a52586cd48fae92dab *extdata/GFF3_files/TheCanonicalGene_v1.gff3
007753349f85778cf5399b28ba7322a3 *extdata/GFF3_files/TheCanonicalGene_v2.gff3
a6c563d0ecab607b69cfce7f915105d4 *extdata/GFF3_files/a.gff3
45af594a0709587ea00c34909e2af727 *extdata/GFF3_files/a.sqlite
ee68f25700d2c6020490388b2f155679 *extdata/GFF3_files/dmel-1000-r5.11.filtered.gff
0d5416f287c604732560c877a318bd07 *extdata/GFF3_files/dmel-1000-r5.11.filtered.sqlite
9c1c0185bca50a5876996ec9300a0914 *extdata/GTF_files/Aedes_aegypti.partial.gtf
f1468abb81c661ac318d77c4ddfb8dbb *extdata/GTF_files/Aedes_aegypti.partial.sqlite
6ff4d870dad0b4e334a13ecc4923f964 *extdata/GTF_files/test1.gtf
afaa31bd1c9554ed3780eb605a94a16b *extdata/cD.exByEdge-SG-Vig.Rda
dc0daac3944514f16c816ccaf1520442 *extdata/cD.exsByGenes-SG-Vig.Rda
ae078e7847d64ac328c3012d845aeff8 *extdata/events.Rda
fb0b31464aef1c487f56fb92a0245492 *extdata/hg19_knownGene_sample.sqlite
0c2888b86f589b5df0c0a15a1b0b7ba0 *extdata/sacCer2_sgdGene_txdb.sqlite
3f5e8fdf7a5dc9354d12967dbb62825f *extdata/sample_ranges.rds
55f987b8e6ce898fe5457ad5192e0eab *help/AnIndex
68f9e3868b5fef8c6f2b7d95fe0d6a61 *help/GenomicFeatures.rdb
e73f9a8e30eedf6c0d04a8ccc1928a0e *help/GenomicFeatures.rdx
4f5b472ef5ec32adaa2cc44d2930f267 *help/aliases.rds
8f3e269dc8a22fbf50abbdca805dea87 *help/paths.rds
c5db2cccd3eee24732dbf67b8587f684 *html/00Index.html
65c70fc56922200fa1b0284de4791678 *html/DEFAULT_CIRC_SEQS.html
15de2e4a406a3e213eb3f5c3e9ce4a64 *html/FeatureDb-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
93592d5a1b49d3bb2fae675f82a37a7c *html/TxDb-class.html
a41eab2d148aada880d456b3ac5aacc5 *html/as-format-methods.html
af5b419db5c73d058b3ae53de49afecd *html/coordinate-mapping-methods.html
227db7f5e38a88e692c82b51f18ffaba *html/coverageByTranscript.html
ffaddbc118cfd3ff75f5f6ecb47f29e2 *html/disjointExons.html
177c59dd7d95dd27e72eaf73ac9a3697 *html/exonicParts.html
00d9acc60d5d3b59ecb5766efcb1f9d7 *html/extractTranscriptSeqs.html
6b12bf1bf9645d092390f36107034548 *html/extractUpstreamSeqs.html
37289f0759c758c22618d8dbc9c6a6ff *html/features.html
3adcb66981e90967fa320f857a1d814e *html/getPromoterSeq-methods.html
7583b363e0bafd4cc5862102d1715dda *html/id2name.html
a8978ea30ae69348da7a43554ec2548b *html/makeFeatureDbFromUCSC.html
8ee77b0a2e69a3cd290112af83417afd *html/makeTxDb.html
ddf692a1b96580776360f9717c3a5568 *html/makeTxDbFromBiomart.html
18e6e242e9bcfb5e00fff6d2da56c180 *html/makeTxDbFromEnsembl.html
89eb23ec14dfa117dc04f06a4cabdf27 *html/makeTxDbFromGFF.html
d0905daa8c6e38aa544a8686bbae0bd8 *html/makeTxDbFromGRanges.html
25db4ad4949e4bfb67fd3c7d62f45d1a *html/makeTxDbFromUCSC.html
c5317a06fac303189038fa1b10ea0ba4 *html/makeTxDbPackage.html
0de5b0a75d33722f875e480f3a4539ce *html/mapIdsToRanges.html
3c23869289d6c43234a173f4edf97f10 *html/mapRangesToIds.html
5bfa828246679f0fac3836f5aca790e5 *html/microRNAs.html
91b8b3d60fdd15e4522e380a293b8621 *html/nearest-methods.html
053daf57e9843104db9e7fbc625aeb13 *html/select-methods.html
ec6bed8ed7d9bab56323259e40efe580 *html/transcriptLengths.html
54fed0e21c804109003dcaeb0fd8a861 *html/transcriptLocs2refLocs.html
11b22f682075aafb5e053eaeb51af1d8 *html/transcripts.html
6a187a22900871b74c5565b2bdaee913 *html/transcriptsBy.html
57646189790516cd3b57a25c104d945a *html/transcriptsByOverlaps.html
93466308eda403f1906cd9d3b4e06706 *script/makeTxDbs.R
929672ec9e5d1ec423769547ac4815ce *script/maketRNAFDb.R
a4607374b945f5b9b3e5cca0db0ed826 *txdb-template/DESCRIPTION
d0de2de792eefaee98767666fb7a3664 *txdb-template/NAMESPACE
c4704556da24063d2a147847b30da1b6 *txdb-template/R/zzz.R
864ec3c2baddb20918b0783a95e7a8d0 *txdb-template/man/package.Rd
4989faef92fbcd4ed30c56f4363fb195 *unitTests/test_TxDb_seqinfo.R
72134f8f6707461480ae4d73cd874f2f *unitTests/test_coordinate-mapping-methods.R
b0af17adc6339aac7536be0177627bfc *unitTests/test_disjointExons.R
83f9d589e28afdb806153f2e9f5e3682 *unitTests/test_getPromoterSeq-methods.R
069b62da8a5029cb6b34744442daabee *unitTests/test_makeIdsForUniqueDataFrameRows.R
fb5b9ee835182e0ce50bf5c6572261b8 *unitTests/test_makeTxDb.R
5abb257a2d283a0c2b4157a8c22d51bf *unitTests/test_makeTxDbFromBiomart.R
c06c8e03f70fd9c1f6895e2ccca33aeb *unitTests/test_makeTxDbFromGFF.R
f4c159ab3a82374b4653e4f2fb0070a0 *unitTests/test_makeTxDbFromGRanges.R
85faeb7ab99c042ba6c834257ef2f957 *unitTests/test_makeTxDbFromUCSC.R
fac1ea1e85597fc45220fdba0390f446 *unitTests/test_mapIdsToRanges.R
25ae5ee9649333e229debd80554e9946 *unitTests/test_select-methods.R
58aa165dc5b1d2d936f3cb28d4c83710 *unitTests/test_transcripts.R
79f9a6f6b786598a4d3186063c3494c0 *unitTests/test_transcriptsBy.R
2a90822b28b6e86d1826f7f2eb362264 *unitTests/test_transcriptsByOverlaps.R
