UTR2UTR53 {GeneStructureTools} | R Documentation

## Annotate UTRs from Gencode GTF as 5' or 3'

### Description

Annotate UTRs from Gencode GTF as 5' or 3'

### Usage

    UTR2UTR53(gtf)

### Arguments

`gtf` | GRanges object of the GTF

### Value

gtf annotation GRanges object

### Author(s)

Beth Signal

### See Also

Other gtf manipulation: `addBroadTypes`, `exonsToTranscripts`, `filterGtfOverlap`, `removeDuplicateTranscripts`, `removeSameExon`, `reorderExonNumbers`

### Examples

    gtfFile <- system.file("extdata","example_gtf.gtf",
    package = "GeneStructureTools")
    gtf <- rtracklayer::import(gtfFile)
    gtf <- UTR2UTR53(gtf)
    table(gtf$type)

[Package GeneStructureTools version 1.4.0 Index]