adapter_filter          Remove full and partial adapters from a
                        ShortReadQ object
check_encoding          Check quality encoding
complex_filter          Remove sequences with low complexity
fixed_filter            Remove a fixed number of bases of a ShortReadQ
                        object from 3' or 5'
inject_letter_random    Inject a letter in a set of sequences at random
                        positions
launch_fqc              Launch FastqCleaner application
length_filter           Filter sequences of a FASTQ file by length
n_filter                Remove sequences with non-identified bases (Ns)
                        from a ShortReadQ object
qmean_filter            Filter sequences by their average quality
random_length           Create a named object with random sequences and
                        qualities
random_qual             Create random qualities for a given encoding
random_seq              Create random sequences
seq_filter              Remove a set of sequences
seq_names               Create sequences names
trim3q_filter           Filter sequences with low quality in 3' tails
unique_filter           Remove duplicated sequences in a FASTQ file
