getExcluded {FELLA} | R Documentation

## Get excluded compounds

### Description

Extractor function for the compounds in the input that were not mapped to the KEGG graph

### Usage

    getExcluded(object)

### Arguments

`object` | FELLA.USER object

### Value

Vector of the excluded compounds

### Examples

    data(FELLA.sample)
    data(input.sample)

    ## No excluded compounds
    obj <- defineCompounds(
    compounds = input.sample,
    data = FELLA.sample)
    getExcluded(obj)

    ## One compound does not map
    ## The user gets a warning as well
    obj <- defineCompounds(
    compounds = c(input.sample, "intruder"),
    data = FELLA.sample)
    getExcluded(obj)

[Package FELLA version 1.4.1 Index]