createBigWigDNAmetArray {ELMER} | R Documentation

## Create a bigwig file for IGV visualization of DNA methylation data (Array)

### Description

Create a bigwig for IGV visualization of DNA methylation data (Array)

### Usage

    createBigWigDNAmetArray(data = NULL, genome = "hg38",
      met.platform = "450K", track.names = NULL, dir = "IGV_tracks")

### Arguments

`data` | A matrix
`genome` | Which genome build will be used: hg38 (default) or hg19.
`met.platform` | DNA methyaltion platform to retrieve data from: EPIC or 450K (default)
`track.names` | Provide a list of track names (.bw) otherwise the deault is the will be samples.bw
`dir` | Which directory files will be saved

### Author(s)

Tiago Chedraoui Silva (tiagochst at gmail.com)

### Examples

     ## Not run:
     data <- assay(getMet(ELMER:::getdata("elmer.data.example")))
     createBigWigDNAmetArray(data = data, met.platform = "450K", genome = "hg38")

    ## End(Not run)

[Package ELMER version 2.8.3 Index]