createSummaryDocument {ELMER} | R Documentation

## Create summary document for TCGA.pipe function

### Description

This function will create a text file with the date of the last run, which aanalysis were performed, the values of the arguments so the user can keep track

### Usage

    createSummaryDocument(analysis = "all", argument.values = "defaults",
      genome = NULL, mae.path = NULL, mode = NULL, direction = NULL,
      group.col = NULL, group1 = NULL, group2 = NULL,
      results.path = NULL)

### Arguments

`analysis` | Which analysis were performed
`argument.values` | Other argument values changed
`genome` | Genome of reference hg38 and hg19
`mae.path` | Where mae is stored
`mode` | Mode "supervised" or "unsupervised" used in the analysis
`direction` | Hypo or hyper direction
`group.col` | Group col
`group1` | Group 1
`group2` | Group 2
`results.path` | Path where the results were saved

[Package ELMER version 2.8.3 Index]