heatmap_HC {DAPAR}R Documentation

This function is inspired from the function heatmap.2 that displays quantitative data in the exprs() table of an object of class MSnSet. For more information, please refer to the help of the heatmap.2 function.

Description

Heatmap inspired by the heatmap.2 function and uses the highcharts library

Usage

heatmap_HC(qData, col = heat.colors(100), labCol)

Arguments

qData

A dataframe that contains quantitative data.

col

colors used for the image. Defaults to heat colors (heat.colors).

labCol

character vectors with column conds to use.

Value

A heatmap

Author(s)

Samuel Wieczorek

Examples

require(DAPARdata)
data(Exp1_R25_pept)
obj <- Exp1_R25_pept[1:100,]
obj <- mvFilter(obj, "wholeMatrix", 6)
qData <- Biobase::exprs(obj)
heatmap_HC(qData)
[Package DAPAR version 1.16.11 Index]