wrapper.heatmapD {DAPAR} | R Documentation

## This function is a wrapper to `heatmap.2` that displays quantitative data in the `exprs()` table of an object of class `MSnSet`

### Description

Builds a heatmap of the quantitative proteomic data of a `MSnSet` object.

### Usage

    wrapper.heatmapD(obj, distance = "euclidean", cluster = "complete",
      dendro = FALSE)

### Arguments

`obj` | An object of class `MSnSet`.
`distance` | The distance used by the clustering algorithm to compute the dendrogram. See `help(heatmap.2)`.
`cluster` | the clustering algorithm used to build the dendrogram. See `help(heatmap.2)`
`dendro` | A boolean to indicate fi the dendrogram has to be displayed

### Value

A heatmap

### Author(s)

Alexia Dorffer

### Examples

    ## Not run:
    require(DAPARdata)
    data(Exp1_R25_pept)
    obj <- mvFilter(Exp1_R25_pept[1:1000], "wholeMatrix", 6)
    wrapper.heatmapD(obj)

    ## End(Not run)

[Package DAPAR version 1.16.11 Index]