histPValue_HC {DAPAR} | R Documentation

## Distribution of p-values (histogram)

### Description

This function plots a distribution of the p-values.

### Usage

    histPValue_HC(pval_ll, bins = 80, pi0 = 1)

### Arguments

`pval_ll` | A list that contains the data
`bins` | An integer that is the number of bins of the histogram.
`pi0` | A float that is the threshold

### Value

A plot

### Author(s)

Samuel Wieczorek

### Examples

    require(DAPARdata)
    data(Exp1_R25_pept)
    obj <- Exp1_R25_pept
    keepThat <- mvFilterGetIndices(obj, 'wholeMatrix', ncol(obj))
    obj <- mvFilterFromIndices(obj, keepThat)
    qData <- Biobase::exprs(obj)
    sTab <- Biobase::pData(obj)
    allComp <- limmaCompleteTest(qData,sTab)
    histPValue_HC(allComp$P_Value[1])

[Package DAPAR version 1.16.11 Index]