CountPep {DAPAR} | R Documentation

## Compute the number of peptides used to aggregate proteins

### Description

This function computes the number of peptides used to aggregate proteins.

### Usage

    CountPep(M)

### Arguments

`M` | A "valued" adjacency matrix in which lines and columns correspond respectively to peptides and proteins.

### Value

A vector of boolean which is the adjacency matrix but with NA values if they exist in the intensity matrix.

### Author(s)

Alexia Dorffer

### Examples

    library(DAPARdata)
    data(Exp1_R25_pept)
    protID <- "Protein.group.IDs"
    M <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], protID, FALSE)
    CountPep(M)

[Package DAPAR version 1.16.11 Index]