alns {CrispRVariants} | R Documentation

## Get alignments

### Description

Return alignments from an object that contains them. For a CrisprSet object, these are truncated, non-chimeric alignments

### Usage

    alns(obj, ...)

    ## S4 method for signature 'CrisprSet'
    alns(obj, ...)

### Arguments

`obj` | An object containing aligned sequences
`...` | additional arguments

### Value

A GAlignmentsList of consensus sequences on the positive strand.

### Author(s)

Helen Lindsay

### Examples

    data("gol_clutch1")
    alns <- alns(gol)

[Package CrispRVariants version 1.12.0 Index]