binaryA {CoGAPS} | R Documentation

## binary heatmap for standardized feature matrix

### Description

creates a binarized heatmap of the A matrix in which the value is 1 if the value in Amean is greater than threshold * Asd and 0 otherwise

### Usage

    binaryA(object, threshold = 3)

    ## S4 method for signature 'CogapsResult'
    binaryA(object, threshold = 3)

### Arguments

`object` | an object of type CogapsResult
`threshold` | the number of standard deviations above zero that an element of Amean must be to get a value of 1

### Value

plots a heatmap of the A Matrix

### Examples

    data(GIST)
    # to expensive to call since it plots
    # binaryA(GIST.result, threshold=3)

[Package CoGAPS version 3.4.1 Index]