ExonPlusUtr.human.GRCh37 {ChIPpeakAnno} | R Documentation

## Gene model with exon, 5' UTR and 3' UTR information for human sapiens (GRCh37) obtained from biomaRt

### Description

Gene model with exon, 5' UTR and 3' UTR information for human sapiens (GRCh37) obtained from biomaRt

### Usage

    data(ExonPlusUtr.human.GRCh37)

### Format

RangedData with slot start holding the start position of the exon, slot end holding the end position of the exon, slot rownames holding ensembl transcript id and slot space holding the chromosome location where the gene is located. In addition, the following variables are included.

`strand`

  1 for positive strand and -1 for negative strand

`description`

  description of the transcript

`ensembl_gene_id`

  gene id

`utr5start`

  5' UTR start

`utr5end`

  5' UTR end

`utr3start`

  3' UTR start

`utr3end`

  3' UTR end

### Details

used in the examples Annotation data obtained by: mart = useMart(biomart = "ensembl", dataset = "hsapiens_gene_ensembl") ExonPlusUtr.human.GRCh37 = getAnnotation(mart=human, featureType="ExonPlusUtr")

### Examples

    data(ExonPlusUtr.human.GRCh37)
    slotNames(ExonPlusUtr.human.GRCh37)

[Package ChIPpeakAnno version 3.18.2 Index]