1c0b7cd28c7e3a176388a86368d10439 *DESCRIPTION
371a7b136f4c7def3576a241c85f4b00 *INDEX
fd9038e407027b43db68346eb2e3ad0c *Meta/Rd.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
d808e9bca3331ce8f89a517c8493ce0c *Meta/hsearch.rds
6982802d19a6e83690e6af8962eaf8e9 *Meta/links.rds
d0dd6a85320140102bff048e9bde6c59 *Meta/nsInfo.rds
44e2aba2f5690d68ddb7a8e8c4f5a062 *Meta/package.rds
7c5b1453303c321a65a3a93d91cb4990 *Meta/vignette.rds
0bed6e8990603ff5d64dca3de540023c *NAMESPACE
95792f973cc8d6aa1980273684962a64 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CNVRanger
d7e7a1372251c5438c1b05a105fafaf0 *R/CNVRanger.rdb
4f5c711c0e348097824fd47ffaa30f08 *R/CNVRanger.rdx
ce269da4eaf753d419a4b3f9c72cde90 *doc/CNVRanger.R
c21f43bc25c430185a85b2d9e47dcd55 *doc/CNVRanger.Rmd
ad2d47a44ecbe02573979c95c98317f5 *doc/CNVRanger.html
62d8a52b9a30efa127c214852ac82ec2 *doc/index.html
c5343759f0a014da9875d14a7fd5e5ea *extdata/CNVOut.txt
6a58cc97f0bb5d688240766564d61505 *extdata/CNVOut_noMap.txt
9fe14aa70e860411803e7e5fb8b4ea7a *extdata/GBM_GISTIC_peaks.rda
9c8027d08167db5252c991b1dcb96036 *extdata/GT1068.cnv.txt.adjusted
b191da6c9489316c6d41eca48e2e9b54 *extdata/GT112.cnv.txt.adjusted
ee407d24bd87142ff186a15045548d30 *extdata/GT1195.cnv.txt.adjusted
6d46dcf9dcac4c7d127501bdfc7de7c2 *extdata/GT1334.cnv.txt.adjusted
4dcf5ee8095c2fbf4612a3bdd9fc40f0 *extdata/GT175.cnv.txt.adjusted
c6185eafc72d3d819460c3cc76f2eaa0 *extdata/GT2391.cnv.txt.adjusted
3c6f17d1bef6e7137947130544e701c5 *extdata/GT356.cnv.txt.adjusted
d73a6e9724d76401baa764f5982d5d4c *extdata/GT546.cnv.txt.adjusted
b9057b3b49ba9b7e00cd700b5a62baf2 *extdata/GT622.cnv.txt.adjusted
c75dc60c5e0f7e78b07e27c1dfa76ac0 *extdata/GT911.cnv.txt.adjusted
a7f3a9565266e574843aa3a283f338a4 *extdata/MapPenn.txt
cb9d4d13fec59d74e29260269e67b1a9 *extdata/Parus_major_chr_sizes.txt
860143afea52eebff90414d2150a9619 *extdata/Pheno.txt
1b7378e5c916b7a805ab299fc608a8ff *extdata/Silva16_PONE_CNV_calls.csv
189ff3fdc582d0a5582245d3e9c648e9 *extdata/counts_cleaned.txt
713abee64c3061a622c3b36671474505 *help/AnIndex
cc20564e13f990c476c1e8189189223c *help/CNVRanger.rdb
5281d88c10417d660957b88235c789b3 *help/CNVRanger.rdx
241a96dde6c4ea22434105c94d21e1f3 *help/aliases.rds
384e9369fa65232f0e0f65ecae84a506 *help/paths.rds
a4767452540216e3285a19c3a0a57033 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
9d2e9fc0186fe12c36e44b7ab0d5ece0 *html/cnvEQTL.html
b07301fbb41cf993e327dd5ed963cf2b *html/cnvGWAS.html
25a0c1aaf5efe202f46d0de1577c0cd3 *html/generateGDS.html
c98b1c2bb275c69bd42f5c962f2fb0a9 *html/importLrrBaf.html
03d0ad10df1bf06a063d290e28b4e5e5 *html/plotEQTL.html
e34629953ac1afeb94d3d8666c960997 *html/plotManhattan.html
83cdfb7c201f9c67206edcfb1b84401e *html/plotRecurrentRegions.html
edf6874d213ee0fca7ab1745acb29ace *html/populationRanges.html
4084b2b201d691918096a054a9f75d2e *html/setupCnvGWAS.html
e0b9bfc0963880df0207ebaf73aba5a8 *vignettes/CNVRanger.png
034ae3351afb42a7975e3817f38d5ea0 *vignettes/CNVsegments.png
c49d479e5c97b8ab9d441dcc3e0c3420 *vignettes/Expression.png
3afbbc51fa5423bda827fef675acdae6 *vignettes/Input.png
3c482e35f515ad3370f4e28e25b3d0f4 *vignettes/Overlap.png
f557c49e6a8636491e7994d852c31992 *vignettes/Phenotype.png
08af82bda00ef3001e376aed18fb374d *vignettes/Summarization.png
