subpathwayKEGGmap {CHRONOS} | R Documentation

## Create links to KEGG pathway map with highlighted subpathways.

### Description

Create links to KEGG pathway map with highlighted subpathways.

### Usage

    subpathwayKEGGmap(subpathways, type, openInBrowser)

### Arguments

`subpathways` | Subpathways as returned by `extractLinearSubpathways` or `extractNonLinearSubpathways`
`type` | Subpathway type (Linear, Non-Linear)
`openInBrowser` | Open link in default browser.

### Value

Vector of links of KEGG pathway maps.

### Examples

    # Load extracted linear subpathways from toy data
    load(system.file('extdata', 'Examples//data.RData', package='CHRONOS'))

    # Opening selected subpathways in default browser
    subs <- linSubs$subpaths[1:3, ]

    subpathwayKEGGmap(subpathways=subs, type='Linear', openInBrowser=FALSE)

[Package CHRONOS version 1.12.0 Index]