importExpressions {CHRONOS} | R Documentation

## Import gene and miRNA expressions from

### Description

Import gene and miRNA expressions from

### Usage

    importExpressions(data, type, sep, org, mRNAnomenclature)

### Arguments

`data` | Expressions data filename or matrix.
`type` | Expressions data type. (or mRNA expressions, type=<nomenType>. Availiable gene expression nomenclature can be found in `convertNomenclature`. For miRNA expressions, type='miRNA'.
`sep` | File delimiter.
`org` | KEGG organism identifier
`mRNAnomenclature` | Nomenclature of user's mRNA expressions

### Details

- Import gene expressions data from CHRONOS/extdata/Input/<userFile>.txt or a supplied matrix.

- Import miRNA expressions data from CHRONOS/extdata/Input/<userFile>.txt or a supplied matrix.

### Value

.

### Examples

    # Example

    load(system.file('extdata', 'Examples//data.RData', package='CHRONOS'))

    importExpressions(data=mRNAexpr, type='mRNA',
                    mRNAnomenclature='entrezgene', sep='\t', org='hsa')
    importExpressions(data=miRNAexpr, type='miRNA', sep='\t', org='hsa')

[Package CHRONOS version 1.12.0 Index]