adjustmentBaalPlot	adjustmentBaalPlot
adjustmentBaalPlot,BaalChIP-method	adjustmentBaalPlot
alleleCounts	alleleCounts
alleleCounts,BaalChIP-method	alleleCounts
BaalChIP	BaalChIP
BaalChIP.get	BaalChIP.get
BaalChIP.get,BaalChIP-method	BaalChIP.get
BaalChIP.report	BaalChIP.report
BaalChIP.report,BaalChIP-method	BaalChIP.report
BaalChIP.run	BaalChIP.run
BaalChIP.run,BaalChIP-method	BaalChIP.run
BaalObject	BaalObject
blacklist_hg19	blacklist_hg19
ENCODEexample	ENCODEexample
FAIREexample	FAIREexample
filter1allele	filter1allele
filter1allele,BaalChIP-method	filter1allele
filterIntbias	filterIntbias
filterIntbias,BaalChIP-method	filterIntbias
getASB	getASB
getASB,BaalChIP-method	getASB
mergePerGroup	mergePerGroup
mergePerGroup,BaalChIP-method	mergePerGroup
pickrell2011cov1_hg19	pickrell2011cov1_hg19
plotQC	plotQC
plotQC,BaalChIP-method	plotQC
plotSimul	plotSimul
plotSimul,BaalChIP-method	plotSimul
QCfilter	QCfilter
QCfilter,BaalChIP-method	QCfilter
summaryASB	summaryASB
summaryASB,BaalChIP-method	summaryASB
summaryQC	summaryQC
summaryQC,BaalChIP-method	summaryQC
UniqueMappability50bp_hg19	UniqueMappability50bp_hg19
