esetMicroRna {AgiMicroRna} | R Documentation

## ExpressionSet object from a uRNAList

### Description

It creates an 'ExpressionSet' object from a 'uRNAList' with unique probe names Tipically, the 'uRNAList object' contains the Total Gene Processed data

### Usage

    esetMicroRna(uRNAList, targets, makePLOT=FALSE,verbose=FALSE)

### Arguments

`uRNAList` | An uRNAList containing normally the processed data
`targets` | data.frame with the targets structure
`makePLOT` | logical, if `TRUE` it makes a 'heatmap' with the 100 greater variance genes, a 'hierarchical cluster' with all the genes and a pca plot
`verbose` | logical, if `TRUE` prints out output

### Details

It creates an ExpressionSet object from a uRNAList. Usually this function is applied to an uRNAList object containing the Total Gene Processed data.

### Value

An ExpressionSet object

### Author(s)

Pedro Lopez-Romero

### See Also

An 'uRNAList' example containing proccesed data is in `ddPROC` and an overview of how the processed data is produced is given in `filterMicroRna`

[Package AgiMicroRna version 2.34.0 Index]