46e844427fcb7ccc84b0210368ce285d *DESCRIPTION
9e19f1a8541f2898b898804fe0e64f95 *INDEX
6d67d142373261379b454d955b4153fb *Meta/Rd.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
47a458ee6faea8d757906a564090d787 *Meta/hsearch.rds
bf61296ce9646ccf23dd6db1a37f08ff *Meta/links.rds
123e61e5c7b690d3b31858b71db80b5e *Meta/nsInfo.rds
9de83cd00f51c94fa3cd5f94342b9b5c *Meta/package.rds
840552a536d7de58c0c0f1a269041b8d *Meta/vignette.rds
2d6169ee1d1db11e8d1b2cad88732cc2 *NAMESPACE
5aeabf76e3392ee5c1333433004148fd *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/ASpli
2fee0a1ff42e368e6eb7615c984169f1 *R/ASpli.rdb
e68af6ce506a13ba154373473cf0d4a1 *R/ASpli.rdx
db987c9225e20b009f4f13069678d8ef *doc/ASpli.R
86ee233c4cda961a42bed6f977e29803 *doc/ASpli.Rnw
d7a8a6de55c137f2b35305a79bb93201 *doc/ASpli.pdf
01e08cb95979a3f316fbafe161a1ce34 *doc/index.html
01050255ece67cfbf3305efb09ba312e *extdata/A_C_0.bam
de3084acc6c7e346f46bbe471e102fb6 *extdata/A_C_0.bam.bai
976c49e3f28840c19214e249509787fb *extdata/A_C_1.bam
d3c48bb879617d99fb6ba4bcd8b1ed59 *extdata/A_C_1.bam.bai
40e5b30bb5bfee10247ce72262543518 *extdata/A_C_2.bam
9c44741bea45305394dad3813dbad293 *extdata/A_C_2.bam.bai
6df717cb64a4640e02959ae7163f8115 *extdata/A_D_0.bam
2cd126307957c799695e45f3c4b2671c *extdata/A_D_0.bam.bai
e0a467934f0fff4676a4aa275939295e *extdata/A_D_1.bam
3b135612ef8cf041c86c6910dd2f84cb *extdata/A_D_1.bam.bai
625254e187de8e229059007af8651c80 *extdata/A_D_2.bam
54da0cec3fb5d0b4786b21c1aa865e5a *extdata/A_D_2.bam.bai
7a33871d5041db6bb9677c74e04a3cc6 *extdata/B_C_0.bam
764f9e93bf27b44662c4dd1d9d33a509 *extdata/B_C_0.bam.bai
52e4181587de71a4e65fa75fe1ac7e6d *extdata/B_C_1.bam
897be18635e36364466bee74c007815f *extdata/B_C_1.bam.bai
98bc2947d22d28e8f994bff3a646dc80 *extdata/B_C_2.bam
322cba3cd82beb3e63e4f6116cd7526e *extdata/B_C_2.bam.bai
b1694eebfa24f2e72782d08152e05016 *extdata/B_D_0.bam
4d79ec9832af3a184330f5c4bc07d0d0 *extdata/B_D_0.bam.bai
74812f1bcdebbf9fdac8a3c242b7a88f *extdata/B_D_1.bam
0756f54932b14aec0131033b4b54d5e0 *extdata/B_D_1.bam.bai
234b9394f5fb97497119280251218b79 *extdata/B_D_2.bam
a6852f7b14f42afae018492d0a66000b *extdata/B_D_2.bam.bai
7b1528ca909724338b2c5e5a2cb79592 *extdata/as.altPSI
82f6f64968cc89609c9914561d2a0856 *extdata/as.esPSI
0f2fe6659126e960cf90ce5298d7668b *extdata/as.irPIR
6d514bfae45dc24a2228274bc496a225 *extdata/as.join
c99964cc3879dd345248a47332f3412e *extdata/as.junctionsPIR
ff2bc0d3569cdba8414acb287a76fcfd *extdata/as.junctionsPSI
92490b5ef841c2f3a12dd73b7628d854 *extdata/chr14.sqlite
a6d104376e1c42a643f8fdd544aafe99 *extdata/counts.bin.rd
e36d5aeeda6e64964c16a7923a37c62a *extdata/counts.e1i.counts
dad679435b40f87506da57164f22b363 *extdata/counts.exon.intron.counts
81d2dbd3ad225c9aeacf564c49b0ca7c *extdata/counts.gene.counts
dfa4cd5b58fafedc2a638b23b92baa45 *extdata/counts.gene.rd
dc106fa2deec740ef0ea9d4fc351e659 *extdata/counts.ie2.counts
8cf9273a3806651892e7d1aeb3694fae *extdata/counts.junction.counts
2dbc36f07fbb20ad407d5167de1327b8 *extdata/du.bins
225be4374b82fe9bfaa70a8f2a46d7ca *extdata/du.genes
3a3d5e990145f3ce13c7931a64c0d5a4 *extdata/du.junctions
b417f146aaaad2b5d073d68371d29080 *extdata/genes.mini.gtf
81a99c9338f547b3dfbe3c517ca76c5a *extdata/genes.mini2.gtf
5ceb734b7ba13652dec61d48f96c236a *help/ASpli.rdb
22415333cc4a3110e9ac6847822491a2 *help/ASpli.rdx
4cc2bd14a3a2fc50f35d475eb3b46638 *help/AnIndex
68483bfac5b9e78151e75beaa34d6311 *help/aliases.rds
bcca1341e6c4e9815177458063220b86 *help/paths.rds
0a715a7a702ba5b1afd7102097aa80ae *html/00Index.html
b6f3ebf0ac9af84e8184b14683bfd18f *html/ASpli-package.html
6eeade24e5d3f222b0ea3261a71de97b *html/ASpliAS-class.html
2f0de1ee907dee02f96817f0fb9fa356 *html/ASpliCounts-class.html
4ae4f896fd81e283f7718818394d0891 *html/ASpliCounts.html
a05cc04fdb8dec4031cc54661ed7e8de *html/ASpliDU-class.html
35d3793b5c8b3c2aeac0dcdf44c9d025 *html/ASpliFeatures-class.html
4f049f45b396c239fb2430f02d796595 *html/AsDiscover-methods.html
abc1a49713dd1e22295770fb3663f322 *html/DUreport.html
7b1f3423f1e2930225f868e957f8cdc4 *html/DUreportBinSplice-method.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
176b3b25a351cc6141320582909d98ba *html/acc_AS.html
276ce298a52e574141ee982ebb764ef5 *html/acc_DU.html
4353d35b301e1455b3bc10198980e735 *html/acc_counts.html
ba87f36eb9df8f7e3f5a428bd95a733c *html/acc_features.html
b92dbcfb72c0b0120cafe1b5583d84a2 *html/binGenome-methods.html
254b0c5a116f67de69b87477a77880b0 *html/binGenome.html
fc5f5d32a28b3a4f74c53b9b5f51ae58 *html/containsJunctions-function.html
39ac3b1aef7d6ebb7de41c50a7449caa *html/example_data.html
ddde52440e9995a9ce1d9364c1d14ea7 *html/filterDU-method.html
521dc861fd731a22c8af0f9a236e13d3 *html/getConditions-function.html
4af457bdb73bc30dfbe61420dd968558 *html/junctionDUreport.html
80a5f8155d88c2dce960cb22223bb131 *html/loadBAM.html
885dedcfcdf02d7058cc1d88d29b45df *html/mergeBinDUAS-method.html
2914140289b75d4c88f4d1895129b6a4 *html/plotBins.html
6fd45fe22769e844a6be18ccbe84f476 *html/plotGenomicRegions.html
e269a76088eb43f86bc291f971f41c78 *html/rds.html
b015381c1e560e79c270e664f4bc11d6 *html/readCounts.html
703b2a0b1b3c7fdfd4aba56144a0662c *html/show-methods.html
347e854fcd7ad0a716b3a3cceee7b560 *html/subset-methods.html
46e233f170bf8eeb8027814cb3132973 *html/write-methods.html
e4d17542051c50caa67f2f5bdba29c61 *html/write.html
