AMARETTO_ExportResults {AMARETTO} | R Documentation

## AMARETTO_ExportResults

### Description

Retrieve a download of all the data linked with the run (including heatmaps)

### Usage

    AMARETTO_ExportResults(AMARETTOinit, AMARETTOresults, data_address,
      Heatmaps = TRUE, CNV_matrix = NULL, MET_matrix = NULL)

### Arguments

`AMARETTOinit` | AMARETTO initialize output
`AMARETTOresults` | AMARETTO results output
`data_address` | Directory to save data folder
`Heatmaps` | Output heatmaps as pdf
`CNV_matrix` | CNV_matrix
`MET_matrix` | MET_matrix

### Value

result

### Examples

    data('ProcessedDataLIHC')
    TargetDirectory <- file.path(getwd(),"Downloads/");dir.create(TargetDirectory)
    AMARETTOinit <- AMARETTO_Initialize(ProcessedData = ProcessedDataLIHC,
                                        NrModules = 2, VarPercentage = 50)

    AMARETTOresults <- AMARETTO_Run(AMARETTOinit)
    AMARETTO_ExportResults(AMARETTOinit,AMARETTOresults,TargetDirectory,Heatmaps = FALSE)

[Package AMARETTO version 1.0.0 Index]