# R Interface to HDF5

## Documentation for package ‘rhdf5’ version 2.28.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

H R S misc

## -- H --

H5 | HDF5 General Library Functions
H5A | HDF5 Attribute Interface
H5Aclose | HDF5 Attribute Interface
H5Acreate | HDF5 Attribute Interface
H5Adelete | HDF5 Attribute Interface
H5Aexists | HDF5 Attribute Interface
H5Aget_name | HDF5 Attribute Interface
H5Aget_space | HDF5 Attribute Interface
H5Aget_type | HDF5 Attribute Interface
H5Aopen | HDF5 Attribute Interface
H5Aopen_by_idx | HDF5 Attribute Interface
H5Aopen_by_name | HDF5 Attribute Interface
H5Aread | HDF5 Attribute Interface
H5Awrite | HDF5 Attribute Interface
H5close | HDF5 General Library Functions
h5closeAll | Close all open HDF5 handles
h5const | HDF5 library constants.
h5constType | HDF5 library constants.
h5createAttribute | Create HDF5 attribute
h5createDataset | Create HDF5 dataset
h5createFile | Create HDF5 file
h5createGroup | Create HDF5 group
H5D | HDF5 Dataset Interface
H5Dclose | HDF5 Dataset Interface
H5Dcreate | HDF5 Dataset Interface
h5default | HDF5 library constants.
h5delete | Delete contents of HDF5 file
H5Dget_create_plist | HDF5 Dataset Interface
H5Dget_space | HDF5 Dataset Interface
H5Dget_storage_size | HDF5 Dataset Interface
H5Dget_type | HDF5 Dataset Interface
h5disableFileLocking | Test and set file locking for HDF5
H5Dopen | HDF5 Dataset Interface
H5Dread | HDF5 Dataset Interface
H5Dset_extent | HDF5 Dataset Interface
h5dump | List the content of an HDF5 file.
H5Dwrite | HDF5 Dataset Interface
h5enableFileLocking | Test and set file locking for HDF5
h5errorHandling | handling of HDF5 error messages
H5F | HDF5 File Interface
H5Fclose | HDF5 File Interface
H5Fcreate | HDF5 File Interface
H5Fflush | HDF5 File Interface
H5Fget_access_plist | HDF5 File Interface
H5Fget_create_plist | HDF5 File Interface
H5Fget_filesize | HDF5 File Interface
H5Fget_name | HDF5 File Interface
H5Fis_hdf5 | HDF5 File Interface
H5Fopen | HDF5 File Interface
H5G | HDF5 Group Interface
H5garbage_collect | HDF5 General Library Functions
H5Gclose | HDF5 Group Interface
H5Gcreate | HDF5 Group Interface
H5Gcreate_anon | HDF5 Group Interface
H5get_libversion | HDF5 General Library Functions
H5Gget_info | HDF5 Group Interface
H5Gget_info_by_idx | HDF5 Group Interface
H5Gget_info_by_name | HDF5 Group Interface
H5Gopen | HDF5 Group Interface
H5I | HDF5 Identifier Interface
H5IdComponent | Class "H5IdComponent"
H5IdComponent-class | Class "H5IdComponent"
H5Iget_name | HDF5 Identifier Interface
H5Iget_type | HDF5 Identifier Interface
H5Iis_valid | HDF5 Identifier Interface
H5L | HDF5 Link Interface
H5Lcreate_external | HDF5 Link Interface
H5Ldelete | HDF5 Link Interface
H5Lexists | HDF5 Link Interface
H5Lget_info | HDF5 Link Interface
h5listIdentifier | list all valid H5 identifier.
h5ls | List the content of an HDF5 file.
H5O | HDF5 Object Interface
H5Oclose | HDF5 Object Interface
H5Oget_num_attrs | HDF5 Object Interface
H5Oget_num_attrs_by_name | HDF5 Object Interface
H5Oopen | HDF5 Object Interface
H5open | HDF5 General Library Functions
H5P | HDF5 Property List Interface
H5Pall_filters_avail | HDF5 Dataset Create Property List Interface
H5Pclose | HDF5 Property List Interface
H5Pclose_class | HDF5 Property List Interface
H5Pcopy | HDF5 Property List Interface
H5Pcreate | HDF5 Property List Interface
H5Pequal | HDF5 Property List Interface
H5Pfill_value_defined | HDF5 Dataset Create Property List Interface
H5Pget_alloc_time | HDF5 Dataset Create Property List Interface
H5Pget_char_encoding | HDF5 Link Create Property List Interface
H5Pget_chunk | HDF5 Dataset Create Property List Interface
H5Pget_chunk_cache | HDF5 Dataset Access Property List Interface
H5Pget_class | HDF5 Property List Interface
H5Pget_create_intermediate_group | HDF5 Link Create Property List Interface
H5Pget_external | HDF5 Dataset Create Property List Interface
H5Pget_external_count | HDF5 Dataset Create Property List Interface
H5Pget_fill_time | HDF5 Dataset Create Property List Interface
H5Pget_fill_value | HDF5 Dataset Create Property List Interface
H5Pget_filter1 | HDF5 Dataset Create Property List Interface
H5Pget_filter2 | HDF5 Dataset Create Property List Interface
H5Pget_filter_by_id1 | HDF5 Dataset Create Property List Interface
H5Pget_filter_by_id2 | HDF5 Dataset Create Property List Interface
H5Pget_layout | HDF5 Dataset Create Property List Interface
H5Pget_libver_bounds | HDF5 Property List Interface
H5Pget_nfilters | HDF5 Dataset Create Property List Interface
H5Pmodify_filter | HDF5 Dataset Create Property List Interface
H5Premove_filter | HDF5 Dataset Create Property List Interface
H5Pset_alloc_time | HDF5 Dataset Create Property List Interface
H5Pset_char_encoding | HDF5 Link Create Property List Interface
H5Pset_chunk | HDF5 Dataset Create Property List Interface
H5Pset_chunk_cache | HDF5 Dataset Access Property List Interface
H5Pset_create_intermediate_group | HDF5 Link Create Property List Interface
H5Pset_deflate | HDF5 Dataset Create Property List Interface
H5Pset_external | HDF5 Dataset Create Property List Interface
H5Pset_fill_time | HDF5 Dataset Create Property List Interface
H5Pset_fill_value | HDF5 Dataset Create Property List Interface
H5Pset_filter | HDF5 Dataset Create Property List Interface
H5Pset_fletcher32 | HDF5 Dataset Create Property List Interface
H5Pset_layout | HDF5 Dataset Create Property List Interface
H5Pset_libver_bounds | HDF5 Property List Interface
H5Pset_nbit | HDF5 Dataset Create Property List Interface
H5Pset_scaleoffset | HDF5 Dataset Create Property List Interface
H5Pset_shuffle | HDF5 Dataset Create Property List Interface
H5Pset_szip | HDF5 Dataset Create Property List Interface
H5P_DATASET_ACCESS | HDF5 Dataset Access Property List Interface
H5P_DATASET_CREATE | HDF5 Dataset Create Property List Interface
H5P_LINK_CREATE | HDF5 Link Create Property List Interface
h5r | Package overview
h5read | Reads and write object in HDF5 files
h5readAttributes | Reads and write object in HDF5 files
H5S | HDF5 Dataspace Interface
h5save | Saves a series of objects to an HDF5 file.
H5Sclose | HDF5 Dataspace Interface
H5Scopy | HDF5 Dataspace Interface
H5Screate | HDF5 Dataspace Interface
H5Screate_simple | HDF5 Dataspace Interface
h5set_extent | Set a new dataset extension
H5Sget_simple_extent_dims | HDF5 Dataspace Interface
H5Sis_simple | HDF5 Dataspace Interface
H5Sselect_hyperslab | HDF5 Dataspace Interface
H5Sselect_index | HDF5 Dataspace Interface
H5Sset_extent_simple | HDF5 Dataspace Interface
H5Sunlimited | HDF5 Dataspace Interface
H5T | HDF5 Datatype Interface
H5Tcopy | HDF5 Datatype Interface
h5testFileLocking | Test and set file locking for HDF5
H5Tset_size | HDF5 Datatype Interface
h5validObjects | list all valid H5 identifier.
h5version | rhdf5 and libhdf5 version numbers
h5write | Reads and write object in HDF5 files
h5write.default | Reads and write object in HDF5 files
h5writeAttribute | Reads and write object in HDF5 files
h5writeAttribute.array | Reads and write object in HDF5 files
h5writeAttribute.character | Reads and write object in HDF5 files
h5writeAttribute.double | Reads and write object in HDF5 files
h5writeAttribute.integer | Reads and write object in HDF5 files
h5writeAttribute.logical | Reads and write object in HDF5 files
h5writeAttribute.matrix | Reads and write object in HDF5 files
h5writeDataset | Reads and write object in HDF5 files
h5writeDataset.array | Reads and write object in HDF5 files
h5writeDataset.character | Reads and write object in HDF5 files
h5writeDataset.data.frame | Reads and write object in HDF5 files
h5writeDataset.double | Reads and write object in HDF5 files
h5writeDataset.integer | Reads and write object in HDF5 files
h5writeDataset.list | Reads and write object in HDF5 files
h5writeDataset.logical | Reads and write object in HDF5 files
h5writeDataset.matrix | Reads and write object in HDF5 files
HDF5 | Package overview
hdf5 | Package overview

## -- R --

rhdf5 | Package overview

## -- S --

show-method | Class "H5IdComponent"

## -- misc --

$-method | Methods for Function '$' in Package 'rhdf5'
$<--method | ~~ Methods for Function '$<-' in Package 'rhdf5' ~~
&-method | Methods for Function '&' in Package 'rhdf5'
[-method | Methods for Function '[' in Package 'rhdf5'
[<--method | Methods for Function '[<-' in Package 'rhdf5'