Package: brainImageR
Type: Package
Title: A Framework for visualizing gene set enrichment throughout
        neurodevelopment
Version: 1.1.0
Authors@R: c(person("Slinker", role = c("aut","cre"), email = "sara.linker@gmail.com"))
Author: Sara Linker [aut, cre]
Maintainer: Sara B Linker <sara.linker@gmail.com>
Description: BrainImageR is a package that provides the user with information of where in the human brain their gene set corresponds to. This is provided both as a continuous variable and as a easily-interpretable image. BrainImageR has additional functionality of identifying approximately when in developmental time that a gene expression dataset corresponds to. Both the spatial gene set enrichment and the developmental time point prediction are assessed in comparison to the Allen Brain Atlas reference data. 
License: CC BY-SA 4.0
LazyData: TRUE
biocViews: Software, Transcription, GeneSetEnrichment, GeneExpression,
        GenePrediction
VignetteBuilder: knitr
Depends: R (>= 3.5)
Imports: BiocGenerics, ExperimentHub, ggplot2, grDevices, grid,
        gridExtra, methods, randomForest, RColorBrewer, stats, testthat
Suggets: BiocStyle, utils
RoxygenNote: 6.0.1
Suggests: knitr, rmarkdown
URL: https://github.com/saralinker/brainImageR
BugReports: https://github.com/saralinker/brainImageR/issues
git_url: https://git.bioconductor.org/packages/brainImageR
git_branch: master
git_last_commit: 6bf20b6
git_last_commit_date: 2018-10-30
Date/Publication: 2018-10-31
NeedsCompilation: no
Packaged: 2018-11-01 02:35:39 UTC; biocbuild
Built: R 3.6.0; ; 2018-11-01 08:04:17 UTC; unix
