| triform-package {triform} | R Documentation |
The Triform method uses model-free statistics to identify peak-like distributions of sequencing reads, taking advantage of an improved peak definition in combination with known profile characteristics.
| Package: | triform |
| Type: | Package |
| Version: | 1.0 |
| Date: | 2012-06-01 |
| License: | GPL-3 |
It is recommended to make a configuration file in YAML format first. Then run functions "preprocess" and "triform" to find peaks in BED-formatted ChIP-sequencing data.
Karl Kornacker <kornacker@midohio.twcbc.com> and Tony Handstad <tony.handstad@gmail.com> Maintainer: <tony.handstad@gmail.com>
## Not run:
preprocess("./config.yml")
triform("./config.yml")
## End(Not run)