3d07d7156c469d7d2e9ab9df1ea46399 *DESCRIPTION
186d1f42bd997bac4e8450f9e13e26c8 *INDEX
bf758aeaf0328791c07088742b6a5fb3 *Meta/Rd.rds
d96e220f923e40668c6efce9752d1675 *Meta/data.rds
77a30dbd9a48297ae6e6ef2194a95267 *Meta/features.rds
41809ccbbec16e5ecdc58c08949c2feb *Meta/hsearch.rds
41a301a3d3d6af95ea9a2a5fea4bf025 *Meta/links.rds
5b57a96e26e52035baee85fac4da1ae7 *Meta/nsInfo.rds
ac4e5c47fd7528be99f3abec3a6e979f *Meta/package.rds
5f6ce7aa37282103e746066834215876 *Meta/vignette.rds
6e08034f74f8210c129eeecbc14b72cf *NAMESPACE
d41d8cd98f00b204e9800998ecf8427e *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/transcriptR
5dd5d9d991340e3f35d08522eec3ea8c *R/transcriptR.rdb
aa286489d78cac07c7bce6058f4bbc40 *R/transcriptR.rdx
cdccf718c0f06aa2b18213b6d1899638 *data/annot.rda
3292676f3b034c821e78e5ba5ed955f1 *data/cds.rda
1b1ba5e803d213909fdfda9ee7ef6fd4 *data/datalist
bde948fa74c19e5c334b355904c7b1f9 *data/tds.rda
29123ca7b1c27c22c15d4f8873a87a6d *doc/index.html
e64758f00d5f437f0917a224b6dcf653 *doc/transcriptR.R
81c92839043b901e0d64be31e975e329 *doc/transcriptR.Rmd
af3f8bc20db1238a74368b63ea1e95d2 *doc/transcriptR.pdf
d50801198a9fc94ca2d340ba90cf9e15 *extdata/chip_reads.bam
b1bd75dd1f9641b9e89f1381a486d259 *extdata/chip_reads.bam.bai
7f2999eb7940a0c31d83d3a39444a75b *extdata/peaks.txt
b3efed05f16945956ab43ba1657823da *extdata/rna_reads.bam
1b5a7ab4d4b50c588dc2b61806e1537f *extdata/rna_reads.bam.bai
f47c69f99c9535dde5180b75f6485c58 *help/AnIndex
c664a3fd102785e8cabbb356e960a8d7 *help/aliases.rds
a1716d1841f30d80309b509152040116 *help/paths.rds
48ee3fba3746eda2c5ba32f19a2bb063 *help/transcriptR.rdb
44ac547eab8e0999f5b276196f16610c *help/transcriptR.rdx
ada4deace522a70f27774322cea324b2 *html/00Index.html
9c210500cc30dad31564c914c0ef6d21 *html/ChipDataSet-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
0fc1dda0fd331b2b20ff68a7d7a3830c *html/TranscriptionDataSet-class.html
380deec7cdd5f58ba44002f828584513 *html/addFeature-methods.html
1bb1f2cd467110a4590d34793582ef8c *html/annot.html
2ffaf09889758b40ab7bef4b30ad2c98 *html/annotateTranscripts-methods.html
8785185dd2d9ef06a1eef345a14ef289 *html/breakTranscriptsByPeaks-methods.html
670786e45cccc52d6bdaa995981237fa *html/cds.html
b1d7a2e2f85b672d6c4725df581ee866 *html/constructCDS.html
6b13543da59385cff3836144817a247b *html/constructTDS.html
bfff0dbf20fdfefa95afba6ff1a48d86 *html/detectTranscripts-methods.html
c6d3bec68abbce584626e65e942ae3d4 *html/estimateBackground-methods.html
6fb28ea6a130260da230fc744c5f23d2 *html/estimateGapDistance-methods.html
e2060b95b5e44eb9d0450cda7d7b57d8 *html/exportCoverage-methods.html
407547f0855036549e354d903cf4aca5 *html/getConfusionMatrix-methods.html
a3bc136840b635532010712e3b09e447 *html/getGenomicAnnot-methods.html
7d06ab82ef5734073bfd0b4148899bba *html/getPeaks-methods.html
4df8c7de440901c27a89f7efa013db0c *html/getPredictorSignificance-methods.html
c91ddd0e86535bad1f37de36864b6b2b *html/getProbTreshold-methods.html
4f552acc9eb455c4b8c28394e4ee3dab *html/getQuadProb-methods.html
3571f88d2c0f33139e4d28889e88a0aa *html/getTestedGapDistances-methods.html
8565057820c55e80eebba696d6674174 *html/getTranscripts-methods.html
bed39e7b143b872c22703f065783895e *html/peaksToBed-methods.html
47482a5e3f5ea93733f5eda5e174cefd *html/plotErrorRate-methods.html
9b71a6204ba3588f085ece695777c15f *html/plotFeatures-methods.html
d09dbd89009b9368dc95d3a5edf8c75d *html/plotGenomicAnnot-methods.html
0b187470e2d461c0b46f02fbd3403a10 *html/plotROC-methods.html
20b988638cca6bd5ccfe2cbb0c53952b *html/predictStrand-methods.html
72a894eb02ea57431a7c85c0a4db37f7 *html/predictTssOverlap-methods.html
463a36a88be968c14d6f5f9c0155ef8f *html/show.html
371e7b035832bf45e9d9447d408e4fc0 *html/tds.html
5da0a55cad19396d262058f9bc3d5999 *html/transcriptsToBed-methods.html
