iRT peptides - independent retention time peptides

Description

iRTpeptides data are used for genSwathIonLib rt normalization assuming.

iRTpeptides first appear in the protViz 0.1.45 package. It has been removed in protViz 0.2.10 to avoid package dependencies.

Format

contains a table

Author(s)

Jonas Grossmann and Christian Panse 2013

References

Using iRT, a normalized retention time for more targeted measurement of peptides. Escher C, Reiter L, MacLean B, Ossola R, Herzog F, Chilton J, MacCoss MJ, Rinner O. Source Proteomics. 2012 Apr;12(8):1111-21. doi: 10.1002/pmic.201100463.

Examples

    plot(sort(iRTpeptides$rt))

    plot(pim<-protViz::parentIonMass(as.character(iRTpeptides$peptide)) ~ iRTpeptides$rt)