442023827ad46b9a4376de18d42783ea *DESCRIPTION
900680b0d4cbc3e877c83f0c40825892 *INDEX
6feb3aedbd7ef171dfb8f67dadca88f6 *Meta/Rd.rds
2a366205ac03f71e432f1c399dcee010 *Meta/data.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
067953cfc45b156f6d2838589a0961f7 *Meta/hsearch.rds
3dbdfe6fa23d076562df2666f87042df *Meta/links.rds
9ba8376d7ee8ac4112449e5fcf258743 *Meta/nsInfo.rds
eeb362937e186882778038d686e31186 *Meta/package.rds
2887aab73613d996fa5d72c37e42bc9b *Meta/vignette.rds
745a248d66abbd2455d3fbd851723b27 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/segmentSeq
82685262b99b948babc438b1335274cf *R/segmentSeq.rdb
9b45e9d528bf4ce0d88484a4bbc22649 *R/segmentSeq.rdx
e0fdeb3e6f073566bf1115a64d7ebeda *data/hSL.RData
aa64b9983d25a48733870ed50d1b6b77 *doc/index.html
15f4c7df8fd84000cb3a9bf405b4e688 *doc/methylationAnalysis.R
5f7a9bccf604aff19003d3e514230544 *doc/methylationAnalysis.Rnw
6a4b601858697aea96220daa79e79a42 *doc/methylationAnalysis.pdf
2177f37f8db17c1eaa5773248b58431d *doc/segmentSeq.R
dc3e5ea6060691ece51c17a273a3b0b5 *doc/segmentSeq.Rnw
6233e2d2fa04e407ba7c72678e4c3064 *doc/segmentSeq.pdf
3e06d773f7fc796b9f8abfbd87859c91 *extdata/SL10.txt
d4614b7e3a4b1d43982ddfb5756b3c55 *extdata/SL26.txt
b743c46dcbdbebc79f25c8402c664099 *extdata/SL32.txt
557c9c052a14cbeb5794a5d40520ee98 *extdata/SL9.txt
f9e97daa13b3f4e7b2554cfc838e20b6 *extdata/short_13_C24_col_trim.fastq_CG_methCalls.gz
6202ab9dfdfca80c02a65f4e6bb528fa *extdata/short_18B_C24_C24_trim.fastq_CG_methCalls.gz
67b74bf8edfa841d34a31dfd467c8c3f *extdata/short_Sample_17A_trimmed.fastq_CG_methCalls.gz
87ff08b3a90565b2d8b826373e30dc0e *extdata/short_Sample_28_trimmed.fastq_CG_methCalls.gz
980b344cf620586acacd236f46a7a13c *help/AnIndex
1a32f35235eea0cd7444f56888cb1654 *help/aliases.rds
ca748c7f6992cec189fa8f976ff66a81 *help/paths.rds
95b57270ba87193b7f3ad37f9553f2dd *help/segmentSeq.rdb
3c3c2925511c838ee0f34b6bcafd0703 *help/segmentSeq.rdx
8910ff360cef884bce33ba2c9c145b2b *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
74fd84526277d86ad92d99a2debacae0 *html/SL.html
7712b9cc7642164770b0f22022a0b56f *html/alignmentClass-class.html
4c9b8b5659ed891a9be89da3471a6368 *html/alignmentData-class.html
aca29a1814291ced7971d978b275831a *html/alignmentMeth-class.html
bfd0a79454b4d9a9c4d62d70eaff26aa *html/averageMethylationRegions.html
f3ed30c4c38f174e843654387f793525 *html/classifySeg.html
8f9fe3d8de3e2c3fc425403c8e998586 *html/findChunks.html
51ee725ced1e25975fa144a971dcb9eb *html/getCounts.html
b86b2b1eae9ea83951e03ff4dd5787bf *html/getOverlaps.html
ac39837781cc733677d296cc1cadf429 *html/givenExpression.html
ac39552fd7680f7a81ee03f72eebcd91 *html/hSL.html
48eb14790ca8e662487650e4e367f823 *html/heuristicSeg.html
bcce1cbf7fa46d2f6de9eba602685c3a *html/lociData-class.html
255f46e66adf6b61093a8ceb38f8c81c *html/lociLikelihoods.html
62ac2e8fa841c81fa8cac1b713a1d918 *html/mergeMethSegs.html
852249158a2569609c33d442e17277fa *html/methData-class.html
458f23357af37e0dfff55aabb304c4d6 *html/normaliseNC.html
d8ac4b1c93cbbe1010f07ae4efa94f80 *html/plotGenome.html
297de965fab06408af5a2bcc7f9411e1 *html/plotMeth.html
352f63f6f85f71a65b9551600b9923a8 *html/plotMethDistribution.html
5d8d4f0fe94070307db66a3b26fd8029 *html/processAD.html
58e69df23905df47201327f5650614bd *html/readMethods.html
6a0cd50402750e83acf6d8f9faa173a7 *html/readMeths.html
6701197e9c6c4d4b6e6a64e22780adc5 *html/segClass-class.html
4c40d2de766f87ba8dee46f984fbad0c *html/segData-class.html
d3904da703755ba1de1322429eff5be8 *html/segMeth-class.html
34eda0fe5510bf651f23081ea7ffa657 *html/segmentSeq-package.html
cb903410deb9df19f4c2f9876b6947f5 *html/selectLoci.html
1672dc5eca3af7430b9a9d62a6621fc0 *html/summariseLoci.html
15210804dd4789ffb8496df3d354d202 *html/thresholdFinder.html
