R: Query information from Ensembl

queryEnsemblByGene {psichomics}

R Documentation

Query information from Ensembl

Description

Query information from Ensembl

Usage

queryEnsemblByGene(gene, species = NULL, assembly = NULL)

queryEnsemblByEvent(event, species, assembly)

Arguments

`gene`	Character: gene
`species`	Character: species (may be `NULL` for an Ensembl identifier)
`assembly`	Character: assembly version (may be NULL for an Ensembl identifier)
`event`	Character: alternative splicing event

Value

Information from Ensembl

Examples

queryEnsemblByGene("BRCA1", "human", "hg19")
queryEnsemblByGene("ENSG00000139618")
event <- "SE_17_-_41251792_41249306_41249261_41246877_BRCA1"
queryEnsemblByEvent(event, species="human", assembly="hg19")

[Package psichomics version 1.8.2 Index]