# Generated by roxygen2: do not edit by hand

export(addAttributeList)
export(convertDataFrameListsToVectors)
export(convertIds)
export(convertSifToGmt)
export(downloadFile)
export(downloadPc2)
export(downloadSignedPC)
export(fetch)
export(filterSif)
export(getCacheFiles)
export(getErrorMessage)
export(getNeighbors)
export(getPc)
export(getPcDatabaseNames)
export(getPcUrl)
export(getShortestPathSif)
export(getSifInteractionCategories)
export(graphPc)
export(integrateBiopax)
export(loadSifInIgraph)
export(mapAttributes)
export(mapValues)
export(mergeBiopax)
export(pcDirections)
export(pcFormats)
export(pcGraphQueries)
export(processPcRequest)
export(readBiopax)
export(readGmt)
export(readPcPathwaysInfo)
export(readSbgn)
export(readSif)
export(readSifnx)
export(searchListOfVectors)
export(searchPc)
export(splitSifnxByPathway)
export(summarize)
export(summarizeSif)
export(toCytoscape)
export(toGSEA)
export(toLevel3)
export(toSBGN)
export(toSif)
export(toSifnx)
export(topPathways)
export(traverse)
export(validate)
import(XML)
import(rJava)
importFrom(R.utils,gunzip)
importFrom(httr,GET)
importFrom(httr,HEAD)
importFrom(httr,accept)
importFrom(httr,add_headers)
importFrom(httr,build_url)
importFrom(httr,content)
importFrom(httr,http_date)
importFrom(httr,http_status)
importFrom(httr,parse_url)
importFrom(httr,progress)
importFrom(httr,url_success)
importFrom(httr,write_disk)
importFrom(igraph,"E<-")
importFrom(igraph,"V<-")
importFrom(igraph,E)
importFrom(igraph,V)
importFrom(igraph,all_shortest_paths)
importFrom(igraph,are.connected)
importFrom(igraph,ecount)
importFrom(igraph,edge.attributes)
importFrom(igraph,ends)
importFrom(igraph,get.edgelist)
importFrom(igraph,graph.attributes)
importFrom(igraph,graph.edgelist)
importFrom(igraph,list.edge.attributes)
importFrom(igraph,list.vertex.attributes)
importFrom(igraph,set_edge_attr)
importFrom(igraph,set_vertex_attr)
importFrom(igraph,vertex.attributes)
importFrom(jsonlite,toJSON)
importFrom(plyr,ldply)
importFrom(readr,cols)
importFrom(readr,read_tsv)
importFrom(rjson,fromJSON)
importFrom(utils,URLencode)
importFrom(utils,read.table)
importFrom(utils,select.list)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(utils,write.table)
