methimpute-package	methimpute-package
arabidopsis_chromosomes	arabidopsis_chromosomes
arabidopsis_genes	arabidopsis_genes
arabidopsis_TEs	arabidopsis_TEs
arabidopsis_toydata	arabidopsis_toydata
binCounts	binning
binMethylome	binning
binning	binning
binomialTestMethylation	binomialTestMethylation
binPositions	binning
callMethylation	callMethylation
callMethylationSeparate	callMethylationSeparate
collapseBins	collapseBins
distanceCorrelation	distanceCorrelation
estimateTransDist	estimateTransDist
exportMethylome	exportMethylome
extractCytosinesFromFASTA	extractCytosinesFromFASTA
getDistinctColors	getDistinctColors
getPosteriors	getPosteriors
getStateColors	getStateColors
import	import
importBismark	import
importBSMAP	import
importBSSeeker	import
importMethylpy	import
importRene	importRene
inflateMethylome	inflateMethylome
loadFromFiles	loadFromFiles
methimpute	methimpute-package
methimpute-objects	methimpute-objects
methimputeBinomialHMM	methimputeBinomialHMM
methimputeData	methimputeData
parameterScan	parameterScan
plotConvergence	plotting
plotEnrichment	plotting
plotHistogram	plotting
plotPosteriorDistance	plotting
plotScatter	plotting
plotting	plotting
plotTransitionProbs	plotting
print.methimputeBinomialHMM	print.methimputeBinomialHMM
transCoord	transCoord
