PPA.liver               A matrix with Posterior Probabilities of
                        Association
calculateThreshold      Calculate PPA significance threshold leading to
                        a desired false discovery rate
eqtlClassifier          Classifying the eQTLs
eqtlFinder              eqtlFinder
eqtlMcmc                Bayesian Multiple eQTL mapping using MCMC
gene                    Gene expression from whole eye tissue from n =
                        68 BXD RIS mice.
genepos                 Gene position data frame
genotype.liver          A set of 290 SNPs from 60 F2 mice.
hotspotFinder           hotspotFinder
iBMQ-package            iBMQ : An Integrated Hierarchical Bayesian
                        Model for Multivariate eQTL Mapping
map.liver               SNP position data frame
phenotype.liver         Gene expression from liver tissue from n = 60
                        F2 mice.
probe.liver             Gene position data frame
snp                     A set of 1700 SNP from 68 BXD RIS mice.
snppos                  SNP position data frame
