get.npci.data {fCI}R Documentation

return a fCI object given the gene expression data

Description

return a fCI object given the gene expression data

Usage

get.npci.data(sample.data.normalized, wt.index, df.index)

Arguments

sample.data.normalized
wt.index
df.index

Details

TBD

Value

expression ratio

a dataframe of fCI gene expression ratios (folds) defined by control-control index and control-case index

Note

TBD

Author(s)

Shaojun Tang

References

http://software.steenlab.org/fCI/

See Also

TBD

Examples

  sample.data.normalized=data.frame(matrix(sample(3:100, 100*4, replace=TRUE),
    100,4))
  wt.index=c(1,2)
  df.index=c(1,3)
  get.npci.data(sample.data.normalized, wt.index, df.index)
[Package fCI version 1.12.0 Index]