| plot,EpivizEnvironment,ANY-method {epivizrChart} | R Documentation |
Generic methods to plot charts and add navigation regions
## S4 method for signature 'EpivizEnvironment,ANY' plot(x, y, ...)
x |
an object of type |
y |
a genomic data object |
... |
other parameters for the plot method |
library(epivizrChart)
library(Homo.sapiens)
require(magrittr)
# example data set
data(sumexp)
# create an environment element
epivizEnv <- epivizEnv()
# chain and add navigation regions and plots.
epivizEnv %>%
plot(sumexp, datasource_name="sumExp", columns=c("cancer", "normal")) %>%
append_region(chr="chr11", start=118000000, end=121000000) %>%
plot(sumexp, datasource_name="sumExp", columns=c("normal", "cancer"))
epivizEnv