07ab8c1a9f8a50d44c0a948a9d42ec7e *CITATION
a39e59b2e37021cde14e9d71d729b01c *DESCRIPTION
391f19e710140c38f44d8075d386e665 *INDEX
e953284ee9bbdf1b41c5ec478cbb3312 *Meta/Rd.rds
77a30dbd9a48297ae6e6ef2194a95267 *Meta/features.rds
3425fd912b7c9c988c10c23b93eb5dc8 *Meta/hsearch.rds
123cb06410ec3a7c1cf3f80eae060ad2 *Meta/links.rds
db30a2039b9e60fb018074dd9e7d20bc *Meta/nsInfo.rds
0c65b8932c46c867fea4667c1f009ecb *Meta/package.rds
fb81f75765eaae928c74a26f99b7e490 *Meta/vignette.rds
25785db5cc9d4ca3063e36e8930b25e5 *NAMESPACE
37b6654ef28dc31b509c3649bd7e2f43 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/customProDB
9a1872d7ec746376d557eb348efddd5f *R/customProDB.rdb
a301d24e5253d61ca302eccdfd8f07fa *R/customProDB.rdx
dd52f893f4188ec4ff2e37fba0cf9d40 *doc/customProDB.R
12db97e4ef9b2e928eeb9b3966950d68 *doc/customProDB.Rnw
e678c1f693e9c9f6ff56c145143402f7 *doc/customProDB.pdf
8fd72a5901591709623e700fa572d239 *doc/index.html
ff6a068e7b4562eb594fa55b7095e368 *extdata/bams/test1_sort.bam
ab67676c326c959cd7fd2c015fe43ecf *extdata/bams/test1_sort.bam.bai
8344f2dbd4827a68ca402168722643da *extdata/bams/test2_sort.bam
1e22c8e2b7302cf72350bd6677a38e4c *extdata/bams/test2_sort.bam.bai
e60dd9c6071f873461d6414a1bf22ded *extdata/bams/test3_sort.bam
7e5cbe91fafc7d08f479d1bdbf5501fd *extdata/bams/test3_sort.bam.bai
70a0b41a9d6105a5d7828f710a110112 *extdata/beds/junctions1.bed
af3d1b708f46275b63ef6408fbb2b310 *extdata/beds/junctions2.bed
c18472db28002552348382aeeaf46e28 *extdata/beds/junctions3.bed
711f95cacceb8d88a14969be455a57a2 *extdata/refseq/cosmic.RData
b7d466b72e98762dda61f3ddce52d57f *extdata/refseq/dbsnpinCoding.RData
0415b426b58bf6d77829b78155285a1b *extdata/refseq/exon_anno.RData
a4c824752b35109a6951ae6cd83b3bc4 *extdata/refseq/ids.RData
715499b3f2148ebec11f50af15fca781 *extdata/refseq/procodingseq.RData
3e6a7c60a7a5fc1787a8205ffd3eb9e5 *extdata/refseq/proseq.RData
29a377ba3a01347a27e8bdc1053c96bc *extdata/refseq/splicemax.RData
341b8507da3a0345c52505525577a2e3 *extdata/refseq/txdb.sqlite
9e9ea25593d6dff684ae411b999fdda6 *extdata/refseq_coding_seq.fasta
ac9339b036da666a3ecdf39b83c06ca6 *extdata/refseq_pro_seq.fasta
394854d152a49775d8bbdb1431dd3c63 *extdata/test_mul.vcf
be3edb220ac58360aeb2db168e6f0cbd *extdata/tmp/test_indel.fasta
79d7fbc7ce8526415f2ca926a967fdaa *extdata/tmp/test_junc.fasta
859042c8502b02a2a401473062330b09 *extdata/tmp/test_rpkm.fasta
92476f93183e7f1a6a9e244ed51a0adb *extdata/tmp/test_snv.fasta
a63ce322af4afe9bebc04312f9cff3c8 *extdata/tmp/test_snv.tab
1a87eb44b5e9d9ed36718422a3d6804e *extdata/vcfs/test1.vcf
49763e2078a780b127bff285658403a6 *extdata/vcfs/test2.vcf
e057764e5e4e743bfb8f398698d31834 *extdata/vcfs/test3.vcf
bfbb508b0c5501a68f3b84360d0b9734 *help/AnIndex
cde17456e247fe4cce8f91c25131c050 *help/aliases.rds
96f3c2fbe0bec1f8a2355d0cb4b16791 *help/customProDB.rdb
a4d314129e1ccaa5927b7f231bdaee83 *help/customProDB.rdx
b0ff5763c0e2cf769e17f583b498171c *help/paths.rds
0dac82ede42fb4d04a98c57ecd66744d *html/00Index.html
6e5435c33667a77ee105a5920620d9d0 *html/Bed2Range.html
32d465ac420cfcc23b52bd8a60cce80b *html/InputVcf.html
5bb2ba44bc89f497872410bc02d0f3a6 *html/JunctionType.html
a3fa4c316aed3b2a16df58604ba8e7de *html/Multiple_VCF.html
a318b071aa794b5ec12bdf5fa87413f7 *html/OutputNovelJun.html
17aa32bf2290395dadd916ade139c9eb *html/OutputVarprocodingseq.html
ea609d43cdd06edb83ae834d8dee163c *html/OutputVarproseq.html
a1bfbbf1066878e7199bbdc1797f67cb *html/OutputVarproseq_single.html
dd352ba9e1c30dab4c1a7afe0679e8fd *html/Outputaberrant.html
1e1f35163b4ad855635591096d6b84cb *html/Outputproseq.html
995788db4d2afc7ac254ff2b3167eea2 *html/OutputsharedPro.html
cafcc869eb7cb65b78231c86f7ba5481 *html/Positionincoding.html
dbd3aefc91c04d2f7133d786798bf644 *html/PrepareAnnotationEnsembl.html
46c1821661eeac531e6af435bd7ec3d8 *html/PrepareAnnotationRefseq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
7384d4e899e20c69aed1d20c49483930 *html/SharedJunc.html
2d970d91451c088bce9a1a8a50bf136d *html/Varlocation.html
8081cb0b88805ae6e084bfb2e225cc10 *html/aaVariation.html
09ab192615365951d0ee6f8d46aab81f *html/calculateRPKM.html
b3d45d63641f89e9d0a7a8f92c5b4373 *html/easyRun.html
ae3ed33e8a136e893618a955d2fdc69a *html/easyRun_mul.html
