GalaxyInputFile-class {RGalaxy}R Documentation

Class "GalaxyInputFile"

Description

Represents a dataset hosted on Galaxy, to be passed to an R function that you expose in Galaxy.

Usage

GalaxyInputFile(required=TRUE, formatFilter=character(0))

Arguments

required

Whether to require that the user provide this dataset.

formatFilter

(optional) A file type for filtering the list of possible input data sets. Should be one of the file types listed in the datatypes_conf.xml file in the root of your Galaxy distribution.

Methods

No methods defined with class "GalaxyInputFile" in the signature.

See Also

link{galaxy}, GalaxyConfig

Examples

    inputfile1=GalaxyInputFile()
    ## The user can only choose csv files:
    inputfile2=GalaxyInputFile(formatFilter="csv")
[Package RGalaxy version 1.26.0 Index]