4cc5d9f7d623e319afcb3f2287880a8e *AlignerIndexPkg-template/DESCRIPTION
d41d8cd98f00b204e9800998ecf8427e *AlignerIndexPkg-template/NAMESPACE
552559b3564ab3d8b8fa307243177ee4 *AlignerIndexPkg-template/inst/dummy.txt
54822f8844b75973286c3c80a513a85b *AlignerIndexPkg-template/man/package.Rd
fdea437131f08c295b914b86a5edb542 *CITATION
b3d2d3c83b0555ac96a63132ce032f51 *DESCRIPTION
5fe555651bda18381df084b80e0cdc7e *INDEX
e0d1fdcfa7c61d672176c71790aac307 *Meta/Rd.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
efda962c9d2b04865a6ca241813d4c16 *Meta/hsearch.rds
0ed9d82eaead70126625f58f79112c1c *Meta/links.rds
6e3db6627b734c201e7f358149f5ba6d *Meta/nsInfo.rds
8b80885f49ea44c39d2a5003a190cdd9 *Meta/package.rds
09376a40751e5f54d048c61a2ff2e913 *Meta/vignette.rds
9e4d50aee39c54256a1f004540afcc38 *NAMESPACE
55ef883893bb0acab0338dd99bba3ba5 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/QuasR
60d6e5c49efd868feba579017f82a628 *R/QuasR.rdb
fb7a20b8d523d11281ca3604c5068a6a *R/QuasR.rdx
ea0e39a1c5ec7272d076c0354fe63403 *doc/QuasR.R
7965d3433ebba81203f70fd929dccc0b *doc/QuasR.Rmd
97f354ad88cb44e74ee2b24ea16bade4 *doc/QuasR.html
55d68cfdf14c430da15b193975abbbe8 *doc/index.html
351e5e3e83799cea5cd439ccbb2ba161 *extdata/NC_001422.1.fa
5d16aef00974765130f439f463d7b01b *extdata/auxiliaries.txt
0f28c6db3f88d348506fe9bb9c3b8e7f *extdata/bis_1_1.fa.bz2
8f2bfd93bf5ff6d961b0be40ee3c1b83 *extdata/chip_1_1.fq.bz2
f1d51570320f43892709fae2c7a28485 *extdata/chip_2_1.fq.bz2
6cf516257ac32f9f881ef384add30864 *extdata/hg19sub.fa
74e8085dc402f573f6869fea3e05d433 *extdata/hg19sub_annotation.gtf
d6dbfb598e3c5d34f637bdd4ff736374 *extdata/hg19sub_snp.txt
b3fc2177fdf05d25f73d060e39fc6e3d *extdata/mirbaseXX_qsr.gff3
7c8c99eb6d9fbab7e4ec80579526fbd0 *extdata/mirna_1.fa
5c5bffc55de06de92ad753f2fcb27649 *extdata/phiX_paired_withSecondary.bam
4d34c56a038b62e5d18516b987827a8f *extdata/phiX_paired_withSecondary.bam.bai
0e71bb84d00cf8f7e887a526d966f9a9 *extdata/phiX_paired_withSecondary_sampleFile.txt
3ed26803aa2f2ced2a52121fd2b75720 *extdata/rna_1_1.fq.bz2
1c25db294e8aa1fa89e5e21594e716d9 *extdata/rna_1_2.fq.bz2
5a61a358d82192eb2c59fae8a500bed3 *extdata/rna_2_1.fq.bz2
c673358cfc1e15b739a3515ee3213ab9 *extdata/rna_2_2.fq.bz2
908f9b45d20258007d0f81d65b419a92 *extdata/samples_bis_single.txt
9c8200c012b2330041c6bdec5e36b03c *extdata/samples_chip_single.txt
91fc43642ee0a321b1343785236d8e21 *extdata/samples_mirna.txt
4fa5d649b3d22195ae12437886fcb261 *extdata/samples_rna_paired.txt
c91ae49b0f37a830d52e71c5d3de8dca *extdata/samples_rna_single.txt
d33320db1c6340c8a5f0d566281f5c03 *help/AnIndex
797777067360ae20b86770e2f70f3e4f *help/QuasR.rdb
e18c7d1ae9b026843b2b23064b3185d2 *help/QuasR.rdx
6b1b44df3f31d43338df7a97464d9944 *help/aliases.rds
525968bae3a52cddde46f7d282b34c1f *help/paths.rds
2dcd88f4cfcdb6ee6bdf277ba6e06b0a *html/00Index.html
bec7afd6e22f9b487aba0b20d6e575ad *html/QuasR-package.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
47d3675a216aa4ba5024443d1c1798e5 *html/alignmentStats.html
e12c6d5d2350d53f05f53e8c16a69534 *html/preprocessReads.html
16dfbde83975a281bcab6a7ff143470b *html/qAlign.html
92c00583a84e8a112d0ea574e4bcf38e *html/qCount.html
7ac37e29a1d16c77574d4b0d5e8484a2 *html/qExportWig.html
7d3aa7d1d44914add95903740c5a724d *html/qMeth.html
8a1706295c12dcb9c3b09d5c1234437d *html/qProfile.html
a941889d9a0d5476918cad965c09c451 *html/qProject-class.html
853eafdccc1c6a25237df9d9aade16ea *html/qQCReport.html
be6e72d686a36a36540407f5a8b04b06 *libs/x64/QuasR.dll
3020a9f2ca081a5046f6a248b8478d08 *unitTests/help_function.R
6eda48dc5e4c9d1a66abec91c4f7b493 *unitTests/test_preprocessReads.R
bf3c7794bfd0a0a2622b5aaec33146e6 *unitTests/test_qAlign.R
85f7bea427614b52facf24876bc42bc3 *unitTests/test_qCount.R
6c790561faeabc8d018df6d9f43f5b23 *unitTests/test_qExportWig.R
174ce20e29832252b8664ee30213b8cc *unitTests/test_qMeth.R
4e265e32ee7c9ec3e4d3e398d735a93f *unitTests/test_qProfile.R
5b75c8af2ba27976cd1a3d7c518bd47d *unitTests/test_qProject.R
c2cb6e0c01c0e025862c9ea652d12690 *unitTests/test_utilities.R
