| subsetCoverage {ORFik} | R Documentation |
GRanges object should be beforehand tiled to size of 1. This subsetting takes account for strand.
subsetCoverage(cov, y)
cov |
A coverage object from coverage() |
y |
GRanges object for which coverage should be extracted |
numeric vector of coverage of input GRanges object
Other features: computeFeaturesCage,
computeFeatures,
disengagementScore,
distToCds, distToTSS,
entropy, floss,
fpkm_calc, fpkm,
fractionLength,
initiationScore,
insideOutsideORF, isInFrame,
isOverlapping,
kozakSequenceScore, orfScore,
rankOrder,
ribosomeReleaseScore,
ribosomeStallingScore,
translationalEff