5b33056f014a0a068f8ad0f5a4c5204b *CITATION
088d3a2517c98baaa14d51bb2337aef1 *DESCRIPTION
1a304282a00f7af3da624cc07738fa91 *INDEX
4ebb7c51983dd8123c87b2ebab1dc3d5 *LICENSE
b67ea4274bfb353d9803c8e5219f9987 *Meta/Rd.rds
68a98bf9e6a49a1ecc5398ebfbeff13a *Meta/data.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
f4f4c702f34ed60a2c7559105471e91c *Meta/hsearch.rds
eb03f4629590a7249200fe8c3e7fc026 *Meta/links.rds
72797a71cff4827edf4dc5d4779a4ad3 *Meta/nsInfo.rds
dca73b1ddd641da4ab78df16636c0721 *Meta/package.rds
73d5d4faee2e6b870ff46c77287bf11b *Meta/vignette.rds
0e1a2261ee93d896b9c08864bbec03ed *NAMESPACE
a11ddf6f4c57ed4402e9a8111ea8424a *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/LedPred
0eccfc40b14d823ef0c4cc9c8682a2bc *R/LedPred.rdb
156172b3cc8daa1f2c0e973dcb4b7265 *R/LedPred.rdx
4dd4491dac16be0339869e4978e7e52c *data/Rdata.rdb
53ca72835eba7f38abe95181e615ce30 *data/Rdata.rds
0c4f5bb84c31375c415e58cf211b48d7 *data/Rdata.rdx
b00a031d2e6036058550b4ce313b5951 *doc/LedPred.R
6853fe0e2a4f971ee89c254cd0b249a0 *doc/LedPred.Rnw
11b9818799f80139800578ec0e280ed5 *doc/LedPred.pdf
ed210de5c0133911c930f2215bdf7611 *doc/index.html
c558e4cf9e8aedf723147f9fe2ceb677 *extdata/259_matrices_lightNames.tf
cd71944c6056e4e08356a47355c149c1 *extdata/2nt_intergenic_droso.freq
7dcf59f7dd722ec4d7bef6cafb36dca1 *extdata/negative_50CADenhancers.bed
75a8ddc57992993ef5e1f80ff80246f9 *extdata/ngs/K4me1_E_F_6_8h_H3_subtracted_reduced.wig
304c3f398c2ad03c716c298dbf22db30 *extdata/ngs/docBoundCRM.bed
1eba9725f6fcb3916311ca1bad6bdf2a *extdata/ngs/dtcfBoundCRM.bed
4cb035fd20f6998a70718703cfc46d25 *extdata/ngs/pmadBoundCRM.bed
4db52dc4f090a36c36f9e3d87858adbd *extdata/ngs/pnrBoundCRM.bed
5e2a74a85b052a3ab2170c6b046b2017 *extdata/ngs/tinBoundCRM.bed
ce900ac5571372ce554f13dda942a5c6 *extdata/positive_50CADenhancers.bed
2b418f42380ef5f9a0ea6480b4f10753 *extdata/prediction_small.bed
dd7685a68986a97e1518545b58f3097e *extdata/testdata/230NonActivesEnhancers4_8h_2seqs.bed
e73ac88451ae16a5ac8e46547c18f7a7 *extdata/testdata/23From66ActiveEnhancersInMesoAt68h_2seqs.bed
48a24b70a0b376535542b996af517398 *extdata/testdata/feature_nb.txt
a97ef38597cdeb98e3d7c75bf9897703 *extdata/testdata/feature_rank.txt
b7d8d9ed8be8a11f0d16efc127510796 *extdata/testdata/test_ngs_bed_small/mfile2.tf
23e7f287fc5fc81d8f4ddd88d02efb0d *extdata/testdata/test_ngs_bed_small/negative_5seqs.bed
6a0ac84a944bdb3e041c7edaa8a53452 *extdata/testdata/test_ngs_bed_small/ngs_beds/ngs.bed
98c3f9fe9d9744335b7fbfcfc1be23d3 *extdata/testdata/test_ngs_bed_small/ngs_beds/ngs2.bed
ef449589142ba89e530b860ffec157ae *extdata/testdata/test_ngs_bed_small/outdir_bak/feature_matrix.tab
4f88ad9538aeda9c1856d6cca75fc19b *extdata/testdata/test_ngs_bed_small/positive_2seqs.bed
911083bc4ec038f411fc3f51bef7fe9b *help/AnIndex
34ed23bed6bfe36e776ba05335944c33 *help/LedPred.rdb
1ea734f3bf1cf33228f8ad710db2dfbe *help/LedPred.rdx
bd0ce5cb91ebfa453e463f86b4d0b571 *help/aliases.rds
02525b1b7ea4ca42693150d5537e5e4d *help/paths.rds
4c252271b2b1110a9defc575d7acd8b1 *html/00Index.html
421a8409d4756dce45db4e807fa83d22 *html/LedPred.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
dc8d6f55fd096e2acb9bd687cc39be03 *html/createModel.html
fb606fc843373d42b96a9c725605d531 *html/crm.features.html
a48561e391499fa36020bb661ec8c753 *html/evaluateModelPerformance.html
09f136304877427049a9035a3695f1d6 *html/feature.ranking.html
70830027c2e5b9f3347113694f66c84d *html/mapFeaturesToCRMs.html
9e77e90537ceffaf88de9f66f1dee394 *html/mcTune.html
42575fc1cc5d786241301d96001bcb2f *html/rankFeatures.html
d7d0a3374eed46025dc1683bfe0090b4 *html/scoreData.html
31258fd59b58c431b116c807f3d766e5 *html/tuneFeatureNb.html
