normTransform {DESeq2} | R Documentation

## Normalized counts transformation

### Description

A simple function for creating a `DESeqTransform` object after applying: `f(count(dds,normalized=TRUE) + pc)`.

### Usage

    normTransform(object, f = log2, pc = 1)

### Arguments

`object` | a DESeqDataSet object
`f` | a function to apply to normalized counts
`pc` | a pseudocount to add to normalized counts

### See Also

`varianceStabilizingTransformation`, `rlog`

[Package DESeq2 version 1.22.2 Index]