# Generated by roxygen2: do not edit by hand

export(DChIPRepResults)
export(getMATfromDataFrame)
export(importData)
export(importDataFromMatrices)
export(importData_soGGi)
export(robust_mean)
export(summarizeCountsPerPosition)
exportClasses(DChIPRepResults)
exportMethods("DESeq2Data<-")
exportMethods("FDRresults<-")
exportMethods("resultsDChIPRep<-")
exportMethods(DESeq2Data)
exportMethods(FDRresults)
exportMethods(plotProfiles)
exportMethods(plotSignificance)
exportMethods(resultsDChIPRep)
exportMethods(runTesting)
exportMethods(show)
import(ChIPpeakAnno)
import(DESeq2)
import(GenomicRanges)
import(S4Vectors)
import(SummarizedExperiment)
import(assertthat)
import(ggplot2)
import(methods)
importFrom(fdrtool,fdrtool)
importFrom(plyr,ldply)
importFrom(plyr,llply)
importFrom(purrr,map)
importFrom(purrr,map_lgl)
importFrom(purrr,pmap)
importFrom(reshape2,melt)
importFrom(smoothmest,smhuber)
importFrom(soGGi,regionPlot)
importFrom(stats,aggregate.data.frame)
importFrom(stats,formula)
importFrom(tidyr,gather)
importFrom(tidyr,spread)
importFrom(utils,read.delim)
